Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01850 ATGGCATCTTCAGTAATGGCTTCTTTGAGTCTGAAACCAACCCCTTTCACAATTGAGAAATCTTCAGTGAAAGGACTTCCTTCAATTTCAAGGCCCTTCAGAGTTGTGGCCAGTGGTATCAAGAAGATTAAGACTGACACACCTTATGGAACTGGTGGTGGCATGGACCTTCCCAATGGACTTGATGCTTCTGGCAGGAAACAAAAGGGAAAGGGTGTTTACCAGTTTGTGGACAAATATGGTGCTAATGTTGATGGATACAGTCCTATCTATGAACCCAAGGACTGGTCTGCAACCGGTGACGTCTACGCCGGAGGTACGACTGGGTTGGCTATATGGGCAGTAACTCTAGCTGGTCTTCTGGCTGGTGGTGCACTTCTTGTCTACAACACAAGTGCTTTGTCACAATAG 411 0.4647 MASSVMASLSLKPTPFTIEKSSVKGLPSISRPFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDVYAGGTTGLAIWAVTLAGLLAGGALLVYNTSALSQ 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01850 136 PANTHER PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC 1 136 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
Car01g01850 136 Pfam Photosystem II 10 kDa polypeptide PsbR 38 135 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01850 K03541 - gmx:100499745 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01850 01 42557887 42560250 Car01g01850 01 42557887 42560250 ECH