Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01821 ATGGGGCTGCAAGAAAACCTTCTGCGAGACATATATGTTTACGGTTTTGAAAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTACAAAGGTCTGGATGTGATTCAACAGGCTCAATCAAGAACTGAGAAGACAACAACATTTTGTTATGGAATTTTGCAGCAGCTCGATTACGGATTGGTTCAGTGCCAGACTTTGGTTTTGGCCCCTACGGGGGAGCTAGCTCAACAGATTGAGAAGGTTATGCAAGCTCTTGGAGATTTCCTTGGTGTTAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTTCGTGAGGAACAACGCATTATCCCTGCTGCTTGTTTGTTATGA 354 0.4435 MGLQENLLRDIYVYGFERPSAIQQRGIVPFYKGLDVIQQAQSRTEKTTTFCYGILQQLDYGLVQCQTLVLAPTGELAQQIEKVMQALGDFLGVKVHACVGGTSVREEQRIIPAACLL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01821 117 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 1 24 IPR014014 GO:0003724
Car01g01821 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 111 IPR027417 -
Car01g01821 117 Gene3D - 1 115 IPR027417 -
Car01g01821 117 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 27 117 IPR014001 -
Car01g01821 117 Pfam DEAD/DEAH box helicase 21 109 IPR011545 GO:0003676|GO:0005524
Car01g01821 117 PANTHER EUKARYOTIC INITIATION FACTOR 4A-2 1 113 - -
Car01g01821 117 PANTHER RNA HELICASE 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01821 Car-Chr1 42059849 42060202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01821 1 114 Eukaryotic Initiation Factors Gene Family AT3G13920 82.456 9.83e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01821 K03257 - gmx:100777628 196.052