Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01819 ATGATGCCTGGCACAAGTATGGATGCACCACATATTGCAAGTCTTGTTGCGCTTATTAAGCAGAAGTTCCCAAATTTCAATCCTCCAGCCATTGGTTATGCACTTTCTACTAATGCGTCTCAAAATGATAAGAGTGGTAGACCGATAATGGCTCAACGATTGTGTGCTTTTCCAGATCTAAGCCAAACCCCGACTACTCCTTTTGACATGGTGATCAATATTCATGGAAGAAATTCAGAGATTTACTTGAGAAGGTTGCTGGGCAAGGTGATCTTACTGGTTAGAGAGTTCCTTGCTGCTAAGGATGATCTAACTCCATATCCAAGGGCAGTCCAAGATTCAGTCAAGGTTACTCAGGAGTTAGGAATAAAGGCACCTACTCACATAAGTATGAAATTAGGCGATTCAATTGGGACCGCAACGGCATTTGTTGGTTTGGCAGCATGTCGTGCATATGCAGTGAAGAAGAACTCTTCTGATTAG 483 0.4265 MMPGTSMDAPHIASLVALIKQKFPNFNPPAIGYALSTNASQNDKSGRPIMAQRLCAFPDLSQTPTTPFDMVINIHGRNSEIYLRRLLGKVILLVREFLAAKDDLTPYPRAVQDSVKVTQELGIKAPTHISMKLGDSIGTATAFVGLAACRAYAVKKNSSD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01819 160 Pfam Subtilase family 1 44 IPR000209 GO:0006508|GO:0008236
Car01g01819 160 Gene3D Peptidase S8/S53 domain 1 65 IPR036852 GO:0004252|GO:0006508
Car01g01819 160 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 1 70 - -
Car01g01819 160 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 70 IPR045051 -
Car01g01819 160 SUPERFAMILY Subtilisin-like 2 49 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01819 Car-Chr1 42011751 42013093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01819 1 70 Subtilisin-like Serine Gene Family AT1G30600 61.429 1.81e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01819 - - cam:101499029 142.124