Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01816 ATGCCCCTAATATCTCCTCCCTCTTCCATGGCTTCTTCAATCCCTCATCACTTCTATTCAAACTACACATTCACTACTAATTCTGATATTCTTGATTTTCCAACACAACTTTTCTCTTCTTCACATGATATCAACAACAACTTTATGGATAATAATAATTTTAATTCTATGATGTGGGGTTGTCAAGATAGTTTAATGCCTGTTTTTGATAATGGAGGATTTGATGATCAAATTGTGTCACTTGATTGTGATACTATGTTGTCTTCTTCTTCTGCTGCTGGTTGGATTAATATTAATCCAAACTTTGGTGATCAACATGATTTTGCTGTTCCAGCTTTGTTGTCAGATTGTAAAATGGGATTCTATGGTGGTGGTAATGCCATTAATGGAGGGTTTCAGAATTTCAATAGCAGATATAATCAGCCACATATTGCTCATGAATTTGGTGATGAATGTTGTGCTTTTGTTGAAGATGTTAAACCACCTTCAGCTTATCCTAATGCTGCAAGAGAAAATTGGGGAATTCAGGGCAATCAAATAGCAGCAGTTGAAGAACCAAACATAAAGGTTGGAAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTTCGATATTTGAAGAAAAGAAATCAAAGAAATTTCAACAAAACCATCAAGTATGCATGTCGGAAAACTTTAGCTGATAGAAGAGTGAGAGTTAGAGGAAGGTTTGCAAGAAACAATGAGATATGTGAAGAAGATCACATGGCCACAAAAAAGCTAGAGAATCATCATGATCACAGTGAAGACTTTTATGCTTCTGATTCATTCCAATTCCAGTTAAAGAATGAGGAGGAGGACTGGCTTCAAGAGGCCATGGCAAGTTTGGTCTATTTATCTCATTCATCACCAGAAGATATGTAA 903 0.3588 MPLISPPSSMASSIPHHFYSNYTFTTNSDILDFPTQLFSSSHDINNNFMDNNNFNSMMWGCQDSLMPVFDNGGFDDQIVSLDCDTMLSSSSAAGWININPNFGDQHDFAVPALLSDCKMGFYGGGNAINGGFQNFNSRYNQPHIAHEFGDECCAFVEDVKPPSAYPNAARENWGIQGNQIAAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNEICEEDHMATKKLENHHDHSEDFYASDSFQFQLKNEEEDWLQEAMASLVYLSHSSPEDM 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01816 300 Pfam CCT motif 198 240 IPR010402 GO:0005515
Car01g01816 300 PANTHER ACTIVATOR OF SPOMIN::LUC2 10 295 - -
Car01g01816 300 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 10 295 - -
Car01g01816 300 ProSiteProfiles CCT domain profile. 198 240 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01816 Car-Chr1 41951382 41953762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01816 194 250 C2C2-CO-like Transcription Factor Family AT5G15850 45.614 7.33e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car01g01816 CCT 9.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01816 - - cam:101492034 591.652