Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01813 ATGGTTGAGCCAACTTCATTTTTGTTCTTCTTCACACTTCATCTATCACTAATAACAGTTGTAATTTCAGCAAAGTTCACTATAGTTAACCAATGCAACTACACAGTATGGCCAGCTTCATATAACACCAGTGGAAGCGCACCACTTGCAACCACCGGTTTCGTTTTACAATCCGGTGAGAATTCCACCGTCACAGCACCGGCTAATTGGAACGGCCGTTTCTGGGGCCGGACTCTCTGTACGACGGATTCCGCCTCCGGAAACTTCTCCTGCGTCACAGGCGACTGTGGATCCGGAAAAATAGCATGCGGCGGCCGTAGTGGATCGCCGCCTGTGACGCTAGCGGAGTTCTCAATAAACAGTTTCAACAATCAAGACTTTTATGATGTAAGCTTAGTTGACGGTTATAACGTCCCGATGGATGTGATTCCGTTAAGTAACTCTGGAAAGTGTAAAAGCACGGGTTGTCCTACGGATCTGAATGCGGTGTGTCCAACGGAGTTGAAAGTAACGGAAAATGGGATAGTTGTGGCGTGTCAGGGTCCTTGTGCTGCTTTCAATTTGCAGTTTTTTTGTTGTGTTGGGAATCATTCAACTCCAGAGACTTGTGAACCAAGTGTGTATGCTCAGATATTCAAAAAGGCATGTCCTCAAGCATATAGTTATGCTTATGATGATAATAGCAGTACGTTCACTTGTGCGGCTACTGATTACCAAATCGTCTTTTGTCCTGCCTCAAATAATGCCAGCTCAGAATCATTGGATCAAGGTGGGAGTATTCCTGTTGGTGAATCACTTACTGCTGGTAGTGGGACAGCTCGATGGCTCTCTCCTTCAGGAGATTTTGCATTTGGGTTTTACCAACTTCCCAATGAGCTTTTCTTACTAGCTATATGGTATGATAAGATACAAACTGATGCTATAATTTGGTATGCAAATGGAGATATTCTTGCTCCTAAAGGATCAAGATTGGTATTAAATGATACTAGTGGGTTGGTGCTCACCAATCCTGGAGGTTCAGAGCTATGGAAATCAAATTTCCCATCAGGTACAATTTCTAATGGTTTAATGAATGATGTTGGAAACTTTCAATTGAGAGACAAAAATTCTGTGGCAATATGGGATAGTTTCAATCATCCTAGTGACACATTAGTTCCTAATCAAGTAATAGAGTTAAATGGCAATCTTTCTTCAAGACAAGGAGAGTTCAACTTCTCACAAGGAAAATTCAAACTTCATCTACAACAGGATGGGAATCTTGTGCTCAACGTTATAAATTTGCCAAGCAACTATAGTTATGATCCTTACTACAGTTCTGGCACCAATAGTAATGCTAAGAATCAAACAAATGTTGGTGAGCGTTTGATATTTGACAAATCAGGGTTTTTATATATAGAGAAAAAAGGAAGGGATAATTTTTCAATTATCAACCCAAATGAGACATTCTCAACAAATGACTTCTACTACAAAGCAACAATTAATTATGATGGAGTTTTCACCATAGCATTTTACCCTAAAGATCCAAAAAGAGGACAAAGTTGGGTTATTGCTAAGACTATACCAGAAAACATATGTTTGTATTCTTCATTCACAAATGGTGAAGGTGTATGTGGTTTTAATAGCATTTGCACCCTTACAAATGACCAAAGGCCAAATTGTACCTGCCCATATGGATATTCTCCAATTGATACATATAACATGTATGCTGGTTGCTTGCCAAATTTTCAAGTCATTTGTCAAGCTGGTGGTAATTGGGATTCACAAGATAATCTATATACGATGAAGGAATTACCAAATACTGATTGGCCTAAATCTGATTATGAAATAATAAGTCCATCTAGTTTACAAGAGTGTAAGGATTCATGTTTGCAAGATTGCTTATGTGTTTTGGTTTCTTTCAACCAAAGTTCCTGCTGGAAGAAGAAGCTTCCACTCTCTTATGGGAGGAATGATCAAGAAGTAAAAGGAATTTCTATCATGAAATTGATGAATAATGATCCTTTATCCTCCTTGCCAAATAAGAAAAAAGGTCATGATACTTTGATCATTGTGATTTCAGTTCTTTTAGGAAGCTCTGTGTTTGTAATTTTAACATTGTTTGGTGCAATATTTTTTGGGTTCCCCTACAACCGCAAGAAAATCAAAAGAAGTATAACTAACAAAAGTGTTGTTGGCAATAACTTGCGCAATTTTAGCTTCAAGGAAATTATTGAAGCAACAGGTAACTTTAGAGAAGAATTAGGAAGAGGATCTTGTAGCATTGTTTACAAAGGAACAATAGAGATGATGATTGGTGTGGCAGTTAAGAAACTAGATAAGTTGATCCAAGATAGTGAAAAGGAATTTCAGACTGAAATGAGTGTCATAGGCCAAACTCATCATAGGAATCTTGTTCGTCTTCTTGGTTATTGCAATGAGGGACAACATCGTATTTTGATATATGAGTTAATGAGCAATGGCACTTTAGCAAGCTTCATTTTCAGCCATTCAAAACCAAATTGGAACCAACGAGTCGAAATTGCCCTTGGGATTGCTAGAGGTCTTGTTTACCTGCATGAGGGATGTTACACTCAAATAATCCATTGTGATATAAAGCCACAAAATATACTTTTAGATGACCACTACAATGCCAGGATTTCAGATTTTGGATTGGCAAAGTTATTGTTGATTAATCAAAGCCACACTGAAACAGGAATTAGAGGAACCAAAGGGTATGTTGCACCAGATTGGTTTAGGAGTGCACCAATCACTGCTAAGGTTGATACTTATAGTTTTGGTGTATTATTGTTAGAGATCATATGTTGTAGGAAAAATGTAGAGAAAGAAATTTTTACTGATGAAAAAGGGATTTTAACTGATTGGGCTTATGATTGTTATAAGACTAAAAGACTTGACATTCTTCTAGACAAAGATATTGAGGTCGGTAATGACATGATGAGCTTGGAAAAGTTTGTGATGATTGTTATTTGGTGCATTCAAGAAGATCCTTCTCTTAGGCCAACAATGAAGGATGTTTTATTGATGCTAGAAGGAATTGTTGAAGTTGTAGTTCCCCCAAGTCCCTATCTATATGGTTCTGTAAGTTGTAATTGA 3093 0.3786 MVEPTSFLFFFTLHLSLITVVISAKFTIVNQCNYTVWPASYNTSGSAPLATTGFVLQSGENSTVTAPANWNGRFWGRTLCTTDSASGNFSCVTGDCGSGKIACGGRSGSPPVTLAEFSINSFNNQDFYDVSLVDGYNVPMDVIPLSNSGKCKSTGCPTDLNAVCPTELKVTENGIVVACQGPCAAFNLQFFCCVGNHSTPETCEPSVYAQIFKKACPQAYSYAYDDNSSTFTCAATDYQIVFCPASNNASSESLDQGGSIPVGESLTAGSGTARWLSPSGDFAFGFYQLPNELFLLAIWYDKIQTDAIIWYANGDILAPKGSRLVLNDTSGLVLTNPGGSELWKSNFPSGTISNGLMNDVGNFQLRDKNSVAIWDSFNHPSDTLVPNQVIELNGNLSSRQGEFNFSQGKFKLHLQQDGNLVLNVINLPSNYSYDPYYSSGTNSNAKNQTNVGERLIFDKSGFLYIEKKGRDNFSIINPNETFSTNDFYYKATINYDGVFTIAFYPKDPKRGQSWVIAKTIPENICLYSSFTNGEGVCGFNSICTLTNDQRPNCTCPYGYSPIDTYNMYAGCLPNFQVICQAGGNWDSQDNLYTMKELPNTDWPKSDYEIISPSSLQECKDSCLQDCLCVLVSFNQSSCWKKKLPLSYGRNDQEVKGISIMKLMNNDPLSSLPNKKKGHDTLIIVISVLLGSSVFVILTLFGAIFFGFPYNRKKIKRSITNKSVVGNNLRNFSFKEIIEATGNFREELGRGSCSIVYKGTIEMMIGVAVKKLDKLIQDSEKEFQTEMSVIGQTHHRNLVRLLGYCNEGQHRILIYELMSNGTLASFIFSHSKPNWNQRVEIALGIARGLVYLHEGCYTQIIHCDIKPQNILLDDHYNARISDFGLAKLLLINQSHTETGIRGTKGYVAPDWFRSAPITAKVDTYSFGVLLLEIICCRKNVEKEIFTDEKGILTDWAYDCYKTKRLDILLDKDIEVGNDMMSLEKFVMIVIWCIQEDPSLRPTMKDVLLMLEGIVEVVVPPSPYLYGSVSCN 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01813 1030 SMART serkin_6 741 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01813 1030 ProSiteProfiles Bulb-type lectin domain profile. 251 378 IPR001480 -
Car01g01813 1030 Gene3D Transferase(Phosphotransferase) domain 1 817 1016 - -
Car01g01813 1030 Gene3D Phosphorylase Kinase; domain 1 706 816 - -
Car01g01813 1030 Pfam D-mannose binding lectin 308 394 IPR001480 -
Car01g01813 1030 Gene3D - 380 529 - -
Car01g01813 1030 Pfam Thaumatin family 30 244 IPR001938 -
Car01g01813 1030 SUPERFAMILY Osmotin, thaumatin-like protein 25 244 IPR037176 -
Car01g01813 1030 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Car01g01813 1030 ProSiteProfiles Thaumatin family profile. 23 244 IPR001938 -
Car01g01813 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 859 871 IPR008271 GO:0004672|GO:0006468
Car01g01813 1030 SMART tha2 26 244 IPR001938 -
Car01g01813 1030 ProSiteProfiles Protein kinase domain profile. 741 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01813 1030 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 168 1030 - -
Car01g01813 1030 CDD STKc_IRAK 747 1012 - -
Car01g01813 1030 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Car01g01813 1030 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Car01g01813 1030 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Car01g01813 1030 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Car01g01813 1030 CDD TLP-PA 25 243 - -
Car01g01813 1030 Gene3D Thaumatin 24 244 IPR037176 -
Car01g01813 1030 SUPERFAMILY Protein kinase-like (PK-like) 723 1010 IPR011009 -
Car01g01813 1030 Pfam Protein kinase domain 744 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01813 1030 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 168 1030 - -
Car01g01813 1030 Gene3D - 253 379 IPR036426 -
Car01g01813 1030 SMART blect_4 265 380 IPR001480 -
Car01g01813 1030 SUPERFAMILY alpha-D-mannose-specific plant lectins 294 442 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01813 Car-Chr1 41917129 41922115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01813 683 1014 Receptor kinase-like Gene Family AT5G45780 40.762 1.40e-72 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car01g01813 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01813 - - mtr:MTR_2g067980 1809.65