Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01808 ATGGCGTCGAACAAGATCGAACGCGGTCACCAGATGTACCGTGACGGACGTTACAAAGAGGCGTTAGGGTTTTACACTGAAGCCATCGCTATGGCGAAGACAAATCCACAGAAGATCGCTTTGCACAGTAATCGAGCTGCTTGTTTCCTCAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGCACCTCAGTGCTCGAGCTTGATTACAATCATAGTGGGGCCTTGATGCTGCGGGCTCAAACATTAGTGACACTGAAGGAATACCATTCAGCACTTTTTGATGTCAACAGACTCTTGGAATTAAATCCATCCTCGGAGGTCTATCAAAATCTTCATGCTCGCTTGAAGACACAGTTGTCACTTGCTCCAATACCagagtcagaagaggagtttgaggaagaggaagatgagaaggctgaggTGATGCTAAAAGGTGATGAAAAGAATGAAGAAATGGGACAGAAACACACGACAACTTCTAATATTAGGACAGATCAAAAGGGTGAGCTTGGCAAAGGTGTTATTAATATTGAATGTGCTCCAGAAGAAACAGACCCCAAGTTTTCATCCAAACAGGGAAGAGATCAAAACTATGAGCCTAAAAAGTGGACAACGGAGCTTGTAGTTCCTAAAGCGAAGAACAAGGAACCAGCCAAGCAACAAACCGAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTGGATTATGCGCGGTGGGACAGtgttgaagatgattctagtgaagaagacgatgaagatgaagatgatgaATCTTTGCCTCAGTATCGTTTCCGTGTGAGAACAATTGGTGTGCGTCCTGTGAAATGA 840 0.3952 MASNKIERGHQMYRDGRYKEALGFYTEAIAMAKTNPQKIALHSNRAACFLKLHDFKKAAEECTSVLELDYNHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLHARLKTQLSLAPIPESEEEFEEEEDEKAEVMLKGDEKNEEMGQKHTTTSNIRTDQKGELGKGVINIECAPEETDPKFSSKQGRDQNYEPKKWTTELVVPKAKNKEPAKQQTEGWQTIPKPKGHSALDYARWDSVEDDSSEEDDEDEDDESLPQYRFRVRTIGVRPVK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01808 279 MobiDBLite consensus disorder prediction 180 267 - -
Car01g01808 279 Gene3D Tetratricopeptide repeat domain 1 154 IPR011990 GO:0005515
Car01g01808 279 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 279 - -
Car01g01808 279 MobiDBLite consensus disorder prediction 185 219 - -
Car01g01808 279 SUPERFAMILY TPR-like 6 119 IPR011990 GO:0005515
Car01g01808 279 MobiDBLite consensus disorder prediction 246 261 - -
Car01g01808 279 SMART tpr_5 73 106 IPR019734 GO:0005515
Car01g01808 279 SMART tpr_5 2 35 IPR019734 GO:0005515
Car01g01808 279 SMART tpr_5 39 72 IPR019734 GO:0005515
Car01g01808 279 Coils Coil 125 145 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01808 2 120 Calmodulin-binding Proteins AT3G25230 33.588 7.48e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01808 - - gmx:100792046 424.861