Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01802 ATGAAGCAGTTGATTCGCCGTTTATCACGAGTGGCTGACTCTTCCGAGTACACGCTACTCCGAACTGACTCAAGCAATCGCCGGCGACCTAGCCGCCGAGTGGAATCGTTCAGGATGGAGGTTTTATCGAAGATCCGGAGATCTTCTTCTGTTGTGCCGGAAGGTCATGTTCCGATCTACGTCGGAGATGAGATGGCGCGATTCGTTGTCTCTGCGGAGCTTCTGAATCATCCGATTTTCGTGAAGCTTTTGAATCAGTCGGCGCAGGAATACGGTTACGAACAGAAAGGTGTGCTTCGATTACCGTGTAATGTTTGCGTTTTTGAGCGCGTGCTTGAAGCGTTGAAGCTTGGTCAAGACACGCGCCACATCATTGAACTTCTCAATTCTTCTTCTTCATCGTCGTCggaggaggaagaggaggagAAATTTTGCTGA 438 0.4703 MKQLIRRLSRVADSSEYTLLRTDSSNRRRPSRRVESFRMEVLSKIRRSSSVVPEGHVPIYVGDEMARFVVSAELLNHPIFVKLLNQSAQEYGYEQKGVLRLPCNVCVFERVLEALKLGQDTRHIIELLNSSSSSSSEEEEEEKFC 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01802 145 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 132 - -
Car01g01802 145 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 132 IPR003676 GO:0009733
Car01g01802 145 Pfam Auxin responsive protein 7 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01802 Car-Chr1 41642451 41643498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01802 49 115 Calmodulin-binding Proteins AT4G31320 38.806 3.47e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01802 K14488 - gmx:100793103 191.815