Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01799 ATGCAGAGCTTCTTCAATGCTTGGATAGTGCTTGCACTCGTTATACTCCTTCCCGTACTTCTCTCTCTTAGAAACCCTCGTGGCGAACCACAAAGCACTTCTTCTTCTTCTTTCTCTGACACTTCCTTTGGTTCTGTCAAGTTAGCCAATACTTTTCCCTTTGAATTCAATCAGAGGATAAGAGATGGTTCCAATCTTGAATATGATTTCTATAGAGATACATGTCCACAAGCAGAAGACATTGTTCGTTCTGCTGTTACTAATATCTACTTTGATCATAGAGATCTTTCGCCttctcttcttcgtcttttctttcatgattgtttcattcaggggtgtgatgcttcattgctgttggaggacaatggtgatagaaacagttcctttgagaagcaagctattccaaatcagacattgaaaggttttgacaaaattgacttgattaaggaggaggtggaacaagcatgtcccggtgttgtgtcttgtgctgacatacttgctcttgcagcaagagattctgttcttttgGCTGGTGGACCTTTCTATCCAGTTTTAACAGGCAGACGAGATAGCCATCAATCGTTTTTCGTGGATGCAACTGATCAAATTCCAAGACCTGATGATAACATTACGCGCACACTTCACCTTTTCAATCTTAGAGGATTTAATACAAGAGAAACAGTCAGTCTTCTTGGAGGACACAACATTGGCAGAATTGGTTGTGATTTCATTCAGCAAAGGCTATACAACTTTCAAGGAACAGGGCAACCAGACCCGAGTATACCTCTCGATTTCCTTAGTCAGATGAGGCAAAACTGTCCAGACGACATCAAGAACATCAGCAGCACCGACAAGTTTTCAACGTTTGTGATTTCGAAGCCGAAGCATGTTCACTTTAACAACAAAGGGATGTCGTACATGCAAGCATTGTCGTCTGCAGTGTCATCTGGAGCGGCATTCGACACTCACTACTACCAAAGCTTGTTGAGAGGAAGAGGGCTACTGTTTGCTGATCAACAACTGATGGCTGAGGAGAAGACTGCTAGATTGGTTTCGGCTTACGCTTCGGATGATGGATCGACTTTTCGGATGGATTTCGCAAGGGTTATGTTGAAGTTGTCCAATCTTGATGTTTTGACTGGAACTCAAGGTCAGAATTACCAAAAAATTTGGAGTAGCATGCTAATGAGAAGGATGGCTAACTTTTCTTCATCACTTGCTTGGTTTGTGTGGAAAACACCTAAGGAACCATGGGAGGCGACCAAACAACCTCTTTGGTCCGAGGAGCCTTGGGAGGGTGACATTTTATGTGAAAAGCCTTGA 1323 0.3545 MQSFFNAWIVLALVILLPVLLSLRNPRGEPQSTSSSSFSDTSFGSVKLANTFPFEFNQRIRDGSNLEYDFYRDTCPQAEDIVRSAVTNIYFDHRDLSPSLLRLFFHDCFIQGCDASLLLEDNGDRNSSFEKQAIPNQTLKGFDKIDLIKEEVEQACPGVVSCADILALAARDSVLLAGGPFYPVLTGRRDSHQSFFVDATDQIPRPDDNITRTLHLFNLRGFNTRETVSLLGGHNIGRIGCDFIQQRLYNFQGTGQPDPSIPLDFLSQMRQNCPDDIKNISSTDKFSTFVISKPKHVHFNNKGMSYMQALSSAVSSGAAFDTHYYQSLLRGRGLLFADQQLMAEEKTARLVSAYASDDGSTFRMDFARVMLKLSNLDVLTGTQGQNYQKIWSSMLMRRMANFSSSLAWFVWKTPKEPWEATKQPLWSEEPWEGDILCEKP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01799 440 Gene3D Peroxidase, domain 2 209 373 - -
Car01g01799 440 PANTHER PEROXIDASE 25-RELATED 70 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PANTHER PEROXIDASE 70 383 - -
Car01g01799 440 Gene3D - 66 208 - -
Car01g01799 440 CDD secretory_peroxidase 65 385 IPR033905 GO:0004601|GO:0042744
Car01g01799 440 PRINTS Plant peroxidase signature 178 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Plant peroxidase signature 311 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Plant peroxidase signature 327 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Plant peroxidase signature 368 381 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Plant peroxidase signature 99 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Plant peroxidase signature 225 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Plant peroxidase signature 75 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Plant peroxidase signature 140 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Plant peroxidase signature 159 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 SUPERFAMILY Heme-dependent peroxidases 66 387 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 Pfam Peroxidase 82 357 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 ProSiteProfiles Plant heme peroxidase family profile. 65 385 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 ProSitePatterns Peroxidases active site signature. 97 108 IPR019794 GO:0004601
Car01g01799 440 PRINTS Haem peroxidase superfamily signature 160 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Haem peroxidase superfamily signature 178 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Haem peroxidase superfamily signature 226 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Haem peroxidase superfamily signature 313 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01799 440 PRINTS Haem peroxidase superfamily signature 97 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01799 Car-Chr1 41442163 41446091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01799 62 385 Peroxidase AT4G33870 46.687 1.57e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01799 K00430 - gmx:100804973 608.986