Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01798 ATGTGCTCTGCCACTGCAACAACACGATTGTTTTCAACCGATAACCACATTCCCAAATCCTTCACTCGTCTCTGTAAGCCCTTTCATTCTAGGGTTCCCACTTCCCTTTCATTCCATTCCACACGACCTTCCTTCTTCGTCAGAGCTACGGTTGTAAAGTGGCGATGTCCAAACCAAACTCTCCCTCCCAACTGCGATACCAGTTTCGAAAAAAAGGCCCTGTATCTGGAGTCTATCGGTATCGACTCTTTCTCACTTATTGAAGATCATCCAATGCTGATCACCGCCTCACTTGATGATATAAAATCCACCGTGGAATACATTACTGCTATGGATTTCACTGCAATCGAGTTTCGACGTATGGTTGGCATGTGCCCTGAGATTCTAACTACCAAAGTCTCGGACATTATACCTGTCTTCACATTCCTTCACCGCGAAGTTCATGTAAGTGGCAAAAATATCAAGCACGTGATAAATCGTCGTCCTCGGTTGATTATATGCAATGTTGATAAGCAACTACGTCCTACCATGTACTTCCTCCAAAGTATTGGCATCGAAGAGGTAAACAAGCACACACATTTGCTGTCATGTAGTGTCGAAGAAAAATTTATACCCCGAATCAATTACTTTGAGAATATCGGGTTCTCTCGCCGCGACACAACTTCGATGTTTCGACGATTTCCTCAGCTGTTTTGTTATAGTATTAAGAATAATTTGGAGCCTAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGGTGAAAGAGTTTCCACATTATTTCTCATTTAGCTTAGAGAATAGGATTAAGCCTAGACATAAAAGGTGTGTAGAAATGGGGGTGTGTTTTCCTCTACCTTTGTTATTAAAGACTAGTGAAGTGACATTTCAGAATAGATTAGAAGCATTTGTAAATTCTTCAACACCCTTGAAAACATCTCCTCTGTGGAGTGCTGGTTGTGATATTATTAATGAAGTATAG 990 0.4111 MCSATATTRLFSTDNHIPKSFTRLCKPFHSRVPTSLSFHSTRPSFFVRATVVKWRCPNQTLPPNCDTSFEKKALYLESIGIDSFSLIEDHPMLITASLDDIKSTVEYITAMDFTAIEFRRMVGMCPEILTTKVSDIIPVFTFLHREVHVSGKNIKHVINRRPRLIICNVDKQLRPTMYFLQSIGIEEVNKHTHLLSCSVEEKFIPRINYFENIGFSRRDTTSMFRRFPQLFCYSIKNNLEPKYNYFVVEMGRDLKEVKEFPHYFSFSLENRIKPRHKRCVEMGVCFPLPLLLKTSEVTFQNRLEAFVNSSTPLKTSPLWSAGCDIINEV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01798 329 Gene3D Transcription termination factor 3, mitochondrial 132 309 IPR038538 -
Car01g01798 329 SMART mt_12 119 150 IPR003690 GO:0003690|GO:0006355
Car01g01798 329 SMART mt_12 221 253 IPR003690 GO:0003690|GO:0006355
Car01g01798 329 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Car01g01798 329 SMART mt_12 254 285 IPR003690 GO:0003690|GO:0006355
Car01g01798 329 SMART mt_12 187 216 IPR003690 GO:0003690|GO:0006355
Car01g01798 329 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
Car01g01798 329 PANTHER OS03G0360600 PROTEIN 58 312 - -
Car01g01798 329 PANTHER CGI-12 PROTEIN-RELATED 58 312 IPR003690 GO:0003690|GO:0006355
Car01g01798 329 Pfam mTERF 146 300 IPR003690 GO:0003690|GO:0006355
Car01g01798 329 Pfam mTERF 61 152 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g01798 mTERF 4.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01798 K15032 - gmx:100794678 545.814