Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01793 ATGGCTTCTTCCTTTTTGACAAAGATTCTTTTAGGTCCTCGCTCGATTATCACTCACCACCCACCAATTCTCTCTTCTTTCTTCTCTGTAAGGATCGCTTTTTGTATCCCTAATTTCATCTGGAAACGGCTGTTCTCTATACAAACTGTTCCAACCTCTACAGCCCAAAACACCAAATTGACTGGTTGGGCTCCTTGTATGGCTTCTTCAATAGTTGGTAGAAGAGCTGCATATTCAACACGATCTGCACCCACAAATGAGCCAGTTGTGTCTGTGGATTGGCTTTATGATAACCTGAAGGAGCCTGATATTAAGGTGGTGGATGCATCCTGGTACATGCCAGATGAGCAAAGGAATCCAATTCAAGAGTATCAGGTTGCTCATATTCCTGGGGCCCTTTTCTTTGACGTAGATGGAATAGCAGATAGAACTACAAAATTACCACACATGTTGCCATCAGAAGAAGCTTTTGCTGCTGCTGTTTCTGCACTTGGCATACAGAACAAAGATGACTTAGTTGTTTATGACGGCAAAGGATTATTTAGTGCGGCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGATAGAATTTGGGTATTAGATGGTGGCCTGCCAAGATGGCGTGCATCGGGTTATGATGTTGAGTCCAGTGCTTCGAGTGATGCTATTCTTAAAGCTAGTGCTGCAAGTGAGGCAATAGAGAAAGTATATCAGGGACAAGCAGTTGGTCCAATCACATTTGAGACTAAATTTCAGCCACATCTTGTTTGGAGCCTTGAACAGGTAACAAGAAATATAGACGAACAATCTCACCAACTCATAGATGCTAGATCAAAGCCCAGGTTTGATGGAACTGCACCAGAGCCTAGAAAGGGAATCAGAAGTGGTCATGTACCTGGCAGCAAATGTATCCCTTTTGCTCAGATGTTAGATGGTTCACAGACATTGTTACCAGCGGATGATCTTAAGAAGCGTTTCGATCAAGAAGGCATCTCTTTGGAAAGTCCGGTAGTGACTTCATGTGGAACTGGGGTAACTGCATGCATTCTCGCATTGGGTCTTCATCGTCTCGGAAAGACTAATGTACCAGTTTATGATGGATCATGGAGTGAATGGGGAGCACAATCTGATACACCTGTTGAATCCTCTCAAACCGAATAG 1164 0.4373 MASSFLTKILLGPRSIITHHPPILSSFFSVRIAFCIPNFIWKRLFSIQTVPTSTAQNTKLTGWAPCMASSIVGRRAAYSTRSAPTNEPVVSVDWLYDNLKEPDIKVVDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKGLFSAARVWWMFRVFGHDRIWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPITFETKFQPHLVWSLEQVTRNIDEQSHQLIDARSKPRFDGTAPEPRKGIRSGHVPGSKCIPFAQMLDGSQTLLPADDLKKRFDQEGISLESPVVTSCGTGVTACILALGLHRLGKTNVPVYDGSWSEWGAQSDTPVESSQTE 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01793 387 CDD TST_Repeat_2 259 375 - -
Car01g01793 387 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 86 219 IPR036873 -
Car01g01793 387 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 261 384 IPR036873 -
Car01g01793 387 MobiDBLite consensus disorder prediction 278 299 - -
Car01g01793 387 SMART rhod_4 90 214 IPR001763 -
Car01g01793 387 SMART rhod_4 258 379 IPR001763 -
Car01g01793 387 Coils Coil 260 280 - -
Car01g01793 387 Gene3D - 82 224 IPR036873 -
Car01g01793 387 ProSitePatterns Rhodanese C-terminal signature. 363 373 IPR001307 GO:0004792
Car01g01793 387 ProSiteProfiles Rhodanese domain profile. 100 217 IPR001763 -
Car01g01793 387 PANTHER THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE 70 383 - -
Car01g01793 387 ProSiteProfiles Rhodanese domain profile. 268 382 IPR001763 -
Car01g01793 387 PANTHER THIOSULFATE SULFERTANSFERASE 70 383 IPR045078 GO:0016783
Car01g01793 387 ProSitePatterns Rhodanese signature 1. 124 135 IPR001307 GO:0004792
Car01g01793 387 CDD TST_Repeat_1 89 212 - -
Car01g01793 387 Pfam Rhodanese-like domain 260 375 IPR001763 -
Car01g01793 387 Pfam Rhodanese-like domain 91 210 IPR001763 -
Car01g01793 387 Gene3D - 253 385 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01793 67 386 Sulfurtransferasese or Rhodanese AT1G79230 76.875 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01793 K01011 - gmx:100798053 642.499