Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01779 ATGGATCCTAGAAATGAATACCAGTCTGGATCACAGTCGGTAATGCATGATCATATGGATGACATTTATAATAGTAGAAGACCACCTGACCTCAATACATCGGAAGTTAAACCTGTACATCATTACTCAATTCAGACGGGTGAGGAATTCTCTCTTGAGTTTATGAGAGATCGGGTGAATCTCGTGAAGCCTGTGTTTTCAAATGTCGGCGATCGCAATTATGCAACAGGTTATATGGAACTCAAAGGCATTTTAGGCATCAGTCATGGAGGATCTGAAAGTGGATCAGACATTTCCATGCTATCAATGGTGGAGAAATATCCTAAGGAGTTTGATAGAATGAATGTATCAATGCTTGGAGACAGAAGCAACTATGGATCAATTCGATCGATACCAAGAACTTCAATGAATCAGGACAACAGACAGTTTGTGCATGGATATGGATATGGCTCTTCTGAAAGTTACGACAACTCATCGATGATGATGAAGTTTCTTTGCAGCTTTGGCGGTAGAATATTGCCGCGACCAAGTGATGGAAAACTAAGGTATGTTGGAGGCCAAACGCATATTCTCCGTATAAGAACGGACTTATCTTGGTACGAGCTTATGCAGAAAGCATTGGTAATCTATAACCAGGTTCATACAATTAAGTATCAGCTTCCCGGTGAAGATCTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTACAGAACATGATGGAAGAATGTAATCATCTAGAAGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTGTTCTCAATCAGTGATTTGGAGGATACTCAGTTTGGTCTCGGCTGCACGAGTGATGATTCTGAAATCCAGTATGTTATTGCTGTTAATGGCATGGACTTGGAACCAAGAAAAAACTCCATGGTTGGTTTCAGCTTTTCTGCAAACGATATAAATGAATTAGACAGGCAAAATATTGGTGGGGAGGCTAATGGAGTCGCGGTTGAATCTACATTTTTCAGAAATGCTCCACTGACGAACAATTTTGACTCGTCATTGCCTACTCATTTTTCACAACCAGTGCTACCAACTCCATCGAATTCATACGAAATGTATCCACAGTTTTATGGCAATCAGATGATGCGCCACGGTGAGCCTAATGGTCATGGTCAATATCTTATGAATCATGGTGTTAATCCTTCTTATAAACCTTTTATTGAAGAAATGCCTATTAATATGCTTCCTCATGTGCCGAGTATTCAACAAGGGGTTTTCAATGAAGGTCATCCACCTAGTGGATTTCAAGTACAAAATTCAGAAATACCAGGAACTTTCATTAGAAAGATGAGTGACAGTTCAATTCAACACGGAGGTGATCTTGGGAAAGTTGTACCCTCGGAAACGCTATCGCCGTCTCCTTCGCATCTGTTTGACGGTTTCTTAAAAAATGATTTTCCTGAAGCAGGTGTTGTAGTTAATGCCCCTGAGGGACATTCTTTGCCTCCAACAAGAACAAACCAGCTCGAAGATTATGACGAGGCTTCTTCTACTTCTAGCAGTGCATACGGTACTCCTTATGTTGATTCGCGCTCCAATGCAGTTGATTTGAGTTGTCTTCATCCTCCTCCACTTCCTAAAAGAGTTTATTATTCGGAAAGGATTCCTAGGGAGCCAGTAGAGTTGCTGAATCGGTCTTCGAAATCGGATGATGCGCACAATTCTCAGTTTCACGTTTCGGATTTACTTTCTGGTGTCAACTCGCAGGATTCAGCTAAAGACTCTGGTAACAACTTGCATGAAGATGGTTATGCTGTTGATAATGCGGCTGCAAATCATCAAATATACAAACAGATGCCTGATGCTAGCAGTCCGATGATTATGTCAAAGCTAACCGAGAATGTGAATCCTGAGTTGAAGCAGGTATTACCAGATAACGAAGGAACCAATGATATGTTAAATAAGGACAATACTGTTTCGTTGGAAACGGAAATATATCCGCTTGAAGGTAAATCAAACATCCCTACTTTTCACCAAGCTTCATCTGTTAAGCACCACGATGATCCGGCATCTAATCTTCCAGATGTTGATTGGGGTGACACCTCTGTGAAAGAATCAAACGATGATTTTAACATTCATGCACTACCCGTCCCTTTGAATGCAAACGCAACTACAAAAGTTGATTCTCAAGCACAAGGTGACATTCTTATCGATATTAATGATCGGTTCCCCCGTGAATTGCTTAATGATATGTTCTCCAAAGCAATACTAGAAGAAGAAGATTCCTCTAGTCAACATCCATTAGCTTCAGATGGAATGAGCCTAAGTATAAACATGGAAAATCCTGACCCTAAACGATGGTCGTATTTTCAAAAATTGGCACAAGAAGGGGTCGACAATGCGTCTCTTATTGACCAGGATCATCTTGTTTTTTCACCTGCTATTGGAAAAGTTGTTGGAGATAATAGAGCTCAACATATTACACCTTTAACTACCGATGAAGTTCCTCTAAACCATGCAGAATTCCATCTCAATTTTGGGGAAGAAATTCAGAAAGACTTGCATGGAAAAAATGGAACAGAAACTACTATTCTGAAATCTGATTATGACCAGTCCCAAATTAATGAAACTGAAAGTATGCAATTTGATGCTATGTTGGAAAACGTAAGAGCACAAGAGTCAGAGTATGAGGTTGGGAAATTTGAAAAGAAAAATAGCAGTCTACCTCCTCTTGATCCTTCTTTAGGAGATTTTGATATGAGTACCTTGCAGGTCATAATGAATGAAGATCTTGAAGAGCTGAAGGAACTAGGTTCTGGTACCTTTGGAACCGTATATCATGGAAAATGGCGAGGAACAGATGTTGCCATTAAGAGAATAAAGAAAACCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTTGAGTTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTACGGTGTGGTGCAGGATGGACCAGGAGGAACAATGGCAACTGTTACGGAGTATATGGTTGATGGTTCTCTTCGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGATTGATAATTGCAATGGATGCAGCGTTTGGAATGGAATATTTGCACTCCAAAAACATTGTGCATTTCGACTTAAAATGTGACAATTTACTTGTAAACTTAAAAGATCCATTACGGCCAATATGCAAGGTCGGTGATTTTGGTTTGTCGAAAATTAAACGAAATACCTTGGTTTCTGGTGGAGTGCGGGGCACTCTACCTTGGATGGCACCAGAGCTGCTGAATGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGTATAGTACTATGGGAGATTCTTACCGGTGAGGAGCCCTATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTTAACAACACACTAAGACCAACAATCCCAAATTATTGTGATATTGAATGGAGAACACTGATGGAACAATGTTGGGCTCCAAATCCTGCAGCTAGGCCATCCTTCACCGAAATAGCGAGTCGATTGCGCATAATGTCCACGACAGCTATCCAAACCAAAACAACAGGCCACAAGGCATCCAAATGA 3615 0.4083 MDPRNEYQSGSQSVMHDHMDDIYNSRRPPDLNTSEVKPVHHYSIQTGEEFSLEFMRDRVNLVKPVFSNVGDRNYATGYMELKGILGISHGGSESGSDISMLSMVEKYPKEFDRMNVSMLGDRSNYGSIRSIPRTSMNQDNRQFVHGYGYGSSESYDNSSMMMKFLCSFGGRILPRPSDGKLRYVGGQTHILRIRTDLSWYELMQKALVIYNQVHTIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLEDREGSQKLRMFLFSISDLEDTQFGLGCTSDDSEIQYVIAVNGMDLEPRKNSMVGFSFSANDINELDRQNIGGEANGVAVESTFFRNAPLTNNFDSSLPTHFSQPVLPTPSNSYEMYPQFYGNQMMRHGEPNGHGQYLMNHGVNPSYKPFIEEMPINMLPHVPSIQQGVFNEGHPPSGFQVQNSEIPGTFIRKMSDSSIQHGGDLGKVVPSETLSPSPSHLFDGFLKNDFPEAGVVVNAPEGHSLPPTRTNQLEDYDEASSTSSSAYGTPYVDSRSNAVDLSCLHPPPLPKRVYYSERIPREPVELLNRSSKSDDAHNSQFHVSDLLSGVNSQDSAKDSGNNLHEDGYAVDNAAANHQIYKQMPDASSPMIMSKLTENVNPELKQVLPDNEGTNDMLNKDNTVSLETEIYPLEGKSNIPTFHQASSVKHHDDPASNLPDVDWGDTSVKESNDDFNIHALPVPLNANATTKVDSQAQGDILIDINDRFPRELLNDMFSKAILEEEDSSSQHPLASDGMSLSINMENPDPKRWSYFQKLAQEGVDNASLIDQDHLVFSPAIGKVVGDNRAQHITPLTTDEVPLNHAEFHLNFGEEIQKDLHGKNGTETTILKSDYDQSQINETESMQFDAMLENVRAQESEYEVGKFEKKNSSLPPLDPSLGDFDMSTLQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKTCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNYCDIEWRTLMEQCWAPNPAARPSFTEIASRLRIMSTTAIQTKTTGHKASK 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01779 1204 Gene3D Phosphorylase Kinase; domain 1 915 1009 - -
Car01g01779 1204 SUPERFAMILY CAD & PB1 domains 177 266 - -
Car01g01779 1204 SMART PB1_new 176 263 IPR000270 GO:0005515
Car01g01779 1204 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1047 1059 IPR008271 GO:0004672|GO:0006468
Car01g01779 1204 MobiDBLite consensus disorder prediction 484 518 - -
Car01g01779 1204 CDD PB1_UP2 165 261 - -
Car01g01779 1204 ProSitePatterns Protein kinases ATP-binding region signature. 928 953 IPR017441 GO:0005524
Car01g01779 1204 MobiDBLite consensus disorder prediction 491 518 - -
Car01g01779 1204 PRINTS Tyrosine kinase catalytic domain signature 1004 1017 IPR001245 GO:0004672|GO:0006468
Car01g01779 1204 PRINTS Tyrosine kinase catalytic domain signature 1041 1059 IPR001245 GO:0004672|GO:0006468
Car01g01779 1204 PRINTS Tyrosine kinase catalytic domain signature 1112 1134 IPR001245 GO:0004672|GO:0006468
Car01g01779 1204 PRINTS Tyrosine kinase catalytic domain signature 1156 1178 IPR001245 GO:0004672|GO:0006468
Car01g01779 1204 Gene3D - 180 263 - -
Car01g01779 1204 Pfam Protein tyrosine and serine/threonine kinase 923 1185 IPR001245 GO:0004672|GO:0006468
Car01g01779 1204 SMART serkin_6 922 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01779 1204 Pfam PB1 domain 178 261 IPR000270 GO:0005515
Car01g01779 1204 CDD STKc_MAP3K-like 928 1185 - -
Car01g01779 1204 SUPERFAMILY Protein kinase-like (PK-like) 911 1185 IPR011009 -
Car01g01779 1204 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 74 1204 - -
Car01g01779 1204 PANTHER SERINE-THREONINE PROTEIN KINASE 74 1204 - -
Car01g01779 1204 ProSiteProfiles Protein kinase domain profile. 922 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01779 1204 Gene3D Transferase(Phosphotransferase) domain 1 1010 1204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01779 Car-Chr1 41028416 41036580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01779 1 1114 MAP Kinase Kinase Kinase AT1G79570 45.267 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Car01g01779 PK_Tyr_Ser-Thr 1.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01779 - - gmx:100801946 1811.96