Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01778 ATGCAGAAACATCAATACAATTCGATGGAACCTCGAAATGAGGAGTTCCATTCTGCGCCACAACCGGTCCTGCAAGACCATTTGGACGGCATGCATACCAATACAAGGCCTCCTCCTTCCTTTAACAACGTGCTCGAAAATAAACCTGTGCATAATTTCTCCATACAGACTGGTGAGGAATTTTCTCTCGAGTTTATGAGAGATAGGGTGAATCTCAGGAAGCCGTCCTTTCCAAATGTTGTAGGTGATCCGAATTATTCAACAGGGTATATGGAATTGAAAGGCATTTTAGGCCATTCAGGTTCTGAAAGCGGTTCCGATATTTCTATGCTCGCGAATATTGAAAAAGGTCCGAAAGAGTTTGACAGAAGGAATACTTCTCTACACCAGGAAAGAAGTAGTTATAGCTCAGCTCGATCGATTCCTAGAACATTGTCTAATCAAGAGAATAACCGTGTCCTTCAAGGTATTTCATCTTCTGGAGCTTCTGAGAGCTCACCTATGAAGATGAAGATTCTATGCAGCTTTGGTGGTAAAATATTACCACGGCCAAGTGATGGAAAGCTTAGATATGTCGGGGGTGAAACACGGATTATTAATATTAGAAAGGACATAAGTTGGCCGGAGCTTATGCTGAAAATATCATCAATCTATAGTGATACTCATGTAATGAAGTATCAGCTCCCTGGAGAAGATCTTGATGCCCTAGTTTCAGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGTCATGATCTACAAAGAAGGAGAGGATCTTTAAAGCTTAGGATGTTCCTATTCTCTATAAATGATTTGGATGATACTCAGTTTGGTCTAGGTAGCGTGGATGGTGATTCCGAAATCCAGTATGTAGTTGCTGTTAACGGCATGAACATGGAATCAAGAAGCAACTCTATCCTTCATAATGTCGGAAGTTCTAATAATATACATGAATTAGACAGACAAAGTATTGGCAAGGAGACTAAAAGAATTGCGGTAGAATCATATGGTGTCGGAAGTTCGTCCTTGACTGGCAATGTTAACTCCGTATTGAAGACAATTCAGCCTTCGCAACCGATGCTGCCAACCTCCTCAAATGCTTATGAAGCCTATCCATTCTTTTATGATGATCAAATCAATCACCATGGGGGAACTAGTCAATATCCAATACACCAAGGCCCTTATCCTTCTAACAAATCCGCTCGCAATCTTGGAGAGGTTCCAGTTTCTTTGCCTACTAATGGTCTTGTAAACCAAGGAATCGTGAGCGAAGCGCAAGTGTCCGGGAACGATCGAGGAAAAGTTTTAACAACAGAAGCACCGTATCCTATTCCTACGCATCAGTTCGAGGGAAGTTTGCAAGGTAATTTATCAGAGGCACCGGTTCCAGCTGCTGTATCAGAAGTGCTTCATGCTGCATTTCCATTAGAAAACAAGAGTAAGCACCAGCCATCTGAAGATTCCTCTTCATTGATTAGTCCTGTGAATCCTACACAGATTTCAAGATCTGGTGAAGATGACTTCTATACTGCATCCGCAGATGCATTCAGTCGTGCTCTTGTTGATGCCGAGTCGAATGTGATTGATTTCAGTTGCCTTGAACCACCCCCACTTCCTAATAGAGTATACTATTCAGAGAGAATTATTCACAGGGAGCAGGCAGATTTGTTGAACCGGTCTGCAAAGTCAGAAGATGCATATGGTTCTCACTTACTCATGTCGGATTTACTTTCTGATTTGAACCATATGAATTCAGTTAATGAATCCAGCGACAGTTTACACAACGAGAATTTGTCAAATCTTAACACGGTGTCCAACTCATCTGAAAAGCATGGCCATACCATCAGCAAACAATTGCCTGATGCAACAAGTAAGGGGAATACAAAGTTATATCAGCTCGTGGATTCTGATTTGAAGCCTGTATTAGCAGATAACAAAATTTCGAGACACGAGGATCAGGTCCGTGGTTCAGAAAATGAGACAAGCATCTCCAAAGATGACCATAAGATTCTCCAAGTTGATGAAACCAAGGGCATTGGGAATCTAGCATTTCGCCGAGTTCCTTCTGTTGAACATAATGAGAATCTAGCATCTAAGGTCCAAGCACCACCTCTTGATGTTAAATCCAAACCTTCTCCGGGTGACATTCTGATTGACATTGACGACAGGTTTCCCCGCGATTTCCTTTATGATATGTTTTCGAAAGCAATTCATTCTGAAGATTCTTCAAACATTAGTCCATTGCAAGCTGATAGAGCAGGTTTGAGCTTAAAAATGGATAATCATGAGCCTAAAAGTTGGTCATATTTTCAGAAGTTGGCACATGAAGGGTTTGATAATGTTTCTCTAATTGATCAGGATAATCTTGTTTCTCTAATGGACAGTAAGTTAAAGCACTCAGCTCCTCTACCAGCAGATGCTGTTATTATGACAGCAAACAAGGAATCAAACCTAAATTTTGGAGACGAAAATCAGAATATCTTACCTGTAATAACTAAATCAGAAGCTATTGTTTTTCATCCTGAAAATAAACATTCTGAACTTAAGGGAAATGAAAATAAGAACATCAACACAACGGTGGAAAATGTTAGACCACAGGAATCTGAATATCAGGATGGCAATAACGAGACAAGGGATGTTGGTGTAGCTCCTCAAGAAATTAGTTTCGAGGAATTTGACATTAGTACTTTGCAGATCATAATGAATGCGGATCTTGAAGAGCTGAGAGAATTGGGCTCTGGTACTTTTGGGACTGTGTATCATGGAAAATGGCGGGGATCAGATGTCGCAATTAAAAGAATAAAGAAAAGTTGCTTCTCTGGCCGGTCTTCTGAACAAGAGAGACTGACCATAGAGTTCTGGCGGGAAGCGGACATACTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGGGTAGTTCAAGATGGACCAGGAGGAACAATGGCAACTGTTACAGAATACATGGTGGATGGTTCTCTTCGGCATGTTTTGCTACGGAAGGATAGGTATCTTGATCGCCGCAAGAGGCTGATAATTGCCATGGACGCAGCTTTTGGAATGGAGTATTTACATGCAAAAAATATTGTTCATTTTGACTTGAAATGTGATAATTTGCTTGTGAACTTGAAGGATCCTTTAAGGCCAATATGCAAGGTAGGCGATTTTGGCCTGTCAAAAATTAAGCGAAATACCCTGGTGACTGGTGGTGTGCGTGGAACTCTACCTTGGATGGCACCAGAGCTGCTGAATGGGAGCAGCAATAAGGTTTCTGAAAAGGTTGATGTGTTCTCCTTTGGCATTGTATTATGGGAGATTCTTACCGGTGAGGAGCCATATGCTAATATGCACTATGGTGCCATTATAGGCGGTATTGTGAACAATACATTAAGACCTTCAATCCCAAGTTATTGTGATCTAGAATGGAGAACATTAATGGAGCAGTGTTGGGCACCTAACCCTGCTGTCAGGCCATCCTTTACAGAAATTGCGCGCCGCTTGCGCGTGATGTCTGCAGCTGCTAGTCAGACCAAAGGACAGGGACACAAGGCATCTAAATGA 3570 0.4157 MQKHQYNSMEPRNEEFHSAPQPVLQDHLDGMHTNTRPPPSFNNVLENKPVHNFSIQTGEEFSLEFMRDRVNLRKPSFPNVVGDPNYSTGYMELKGILGHSGSESGSDISMLANIEKGPKEFDRRNTSLHQERSSYSSARSIPRTLSNQENNRVLQGISSSGASESSPMKMKILCSFGGKILPRPSDGKLRYVGGETRIINIRKDISWPELMLKISSIYSDTHVMKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQRRRGSLKLRMFLFSINDLDDTQFGLGSVDGDSEIQYVVAVNGMNMESRSNSILHNVGSSNNIHELDRQSIGKETKRIAVESYGVGSSSLTGNVNSVLKTIQPSQPMLPTSSNAYEAYPFFYDDQINHHGGTSQYPIHQGPYPSNKSARNLGEVPVSLPTNGLVNQGIVSEAQVSGNDRGKVLTTEAPYPIPTHQFEGSLQGNLSEAPVPAAVSEVLHAAFPLENKSKHQPSEDSSSLISPVNPTQISRSGEDDFYTASADAFSRALVDAESNVIDFSCLEPPPLPNRVYYSERIIHREQADLLNRSAKSEDAYGSHLLMSDLLSDLNHMNSVNESSDSLHNENLSNLNTVSNSSEKHGHTISKQLPDATSKGNTKLYQLVDSDLKPVLADNKISRHEDQVRGSENETSISKDDHKILQVDETKGIGNLAFRRVPSVEHNENLASKVQAPPLDVKSKPSPGDILIDIDDRFPRDFLYDMFSKAIHSEDSSNISPLQADRAGLSLKMDNHEPKSWSYFQKLAHEGFDNVSLIDQDNLVSLMDSKLKHSAPLPADAVIMTANKESNLNFGDENQNILPVITKSEAIVFHPENKHSELKGNENKNINTTVENVRPQESEYQDGNNETRDVGVAPQEISFEEFDISTLQIIMNADLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFSGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPSIPSYCDLEWRTLMEQCWAPNPAVRPSFTEIARRLRVMSAAASQTKGQGHKASK 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01778 1189 MobiDBLite consensus disorder prediction 487 506 - -
Car01g01778 1189 CDD PB1_UP2 173 269 - -
Car01g01778 1189 Pfam Protein tyrosine and serine/threonine kinase 908 1170 IPR001245 GO:0004672|GO:0006468
Car01g01778 1189 Pfam PB1 domain 186 269 IPR000270 GO:0005515
Car01g01778 1189 ProSiteProfiles Protein kinase domain profile. 907 1172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01778 1189 SUPERFAMILY Protein kinase-like (PK-like) 897 1169 IPR011009 -
Car01g01778 1189 Gene3D Transferase(Phosphotransferase) domain 1 995 1189 - -
Car01g01778 1189 MobiDBLite consensus disorder prediction 606 625 - -
Car01g01778 1189 CDD STKc_MAP3K-like 913 1170 - -
Car01g01778 1189 SMART PB1_new 184 269 IPR000270 GO:0005515
Car01g01778 1189 Gene3D Phosphorylase Kinase; domain 1 901 994 - -
Car01g01778 1189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1032 1044 IPR008271 GO:0004672|GO:0006468
Car01g01778 1189 MobiDBLite consensus disorder prediction 481 506 - -
Car01g01778 1189 PANTHER SERINE-THREONINE PROTEIN KINASE 83 1189 - -
Car01g01778 1189 SMART serkin_6 907 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01778 1189 SUPERFAMILY CAD & PB1 domains 185 276 - -
Car01g01778 1189 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 83 1189 - -
Car01g01778 1189 ProSitePatterns Protein kinases ATP-binding region signature. 913 938 IPR017441 GO:0005524
Car01g01778 1189 PRINTS Tyrosine kinase catalytic domain signature 989 1002 IPR001245 GO:0004672|GO:0006468
Car01g01778 1189 PRINTS Tyrosine kinase catalytic domain signature 1026 1044 IPR001245 GO:0004672|GO:0006468
Car01g01778 1189 PRINTS Tyrosine kinase catalytic domain signature 1097 1119 IPR001245 GO:0004672|GO:0006468
Car01g01778 1189 PRINTS Tyrosine kinase catalytic domain signature 1141 1163 IPR001245 GO:0004672|GO:0006468
Car01g01778 1189 Gene3D - 188 270 - -
Car01g01778 1189 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01778 Car-Chr1 41005195 41012904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01778 5 610 MAP Kinase Kinase Kinase AT1G16270 36.834 4.67e-89 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Car01g01778 PK_Tyr_Ser-Thr 2.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01778 - - cam:101510527 2343.15