Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01777 ATGGACAAATCAGATCAGACTCAAGAGCAGCAACAGTGGCAACAAAATGTGATGGACTTTGCACCAGGTGCTAGCAAAATGGCGTATTCTTCTCACTATCCGACTCAAGGGCAGCAACAAAATGTGATGGAACTTGCACCAGGTGCTAGCCAAATGGTGCATTCTTCTCACTACCAAACTCAAGAGCAGCAACAAAATGGGATGGAATTTACACCGGGTGCTAGCCAAATGGCGTATTCTTCTTACTACCTGACTCAAGAGCTGCAACAAAATGTGATGGAATTTGCACTAGGTGCTAGCCAAATGGCGTATCACTACCCGGCTCAAGAGCAGCAACGCCAACAACAAAATGGGATGGAATTTGCACTGGGTGCTAGCCAAATGGCGTATTCTTCTCACTCCCCGACTCAAGAGCAGCAACAGCAACTACAAAATGTGATGGAGTTTGCACCAGGTGCTAGCCATATGGCGTATTCTTCTCACTTCCCGACTCAAGAGCAGCAACAACAAAATGTGATGGAATTTGCACCAGATGCTAGCCAAATGGTGCATTCTTCTCACTACCAGACTCAAGAGCAGCTACAAAATGTGATGGAATTTGCATCAGGTGCTAGCCAAATGGCGTATTCTTCTCACTACCCGACTCAAGAGAAGCAACAAAATGTGATCGAATTTGCACCAGGTCCTAGCCAAATGGCGTATTCTGACCACTATCCAACTCAAGAACAGCAACAAAATGTGACGGAATCTGTACCCAGTGCTAGCCAAATGGTGAATTCTTCTCACTACCATACTCAAGAGAAGCATGTGATGGAATCTGTACCAGGTGCTAGCCAAATGGTAAATTCTTCTCACTACCAGACTCAAGAGATGCAACTGCAGCAACAAAATGTGATGAAATTTGCAGCAGGTGTTGGCAAAACGGCGTATTCTTCTCACCACCCAACTCAAGAGCAGCAACATGTGATGGAATCTGTACCAGGTGCTAGCCAAATGTCAAATTCTTCTCACTACCAGACTCAAGAGCAGCAACTGCAGCAACATAATGTGATGAAATTTGCACCAGGTGTTAGCCAAATGGCGTATTCTTCTCACCACCCAACTCAAGAGCAGCAACATGTGATGGAATCTGTACCAAGTGCTAGCCAAATGGTGAATTCTTCTCACTACCAGACTCAAGAGCAGCCACTGCAGCAACAAAATGGGATGAAATTTGCACCAGGTGTTAGCCAAATGGTGTATTCTTCTCAAAACCCAACTCAAGAGCCTCAACAGCAGCAACAACATGTGATGGAATCTCTACCAGGTGCTAGCGAAATGGCGAATTCTTCTCACTACCACACTCAAGAGCAGCAACAAAATGGGATGAAGTCTGCACCAGTGGCTAGCCAAATGGTGTATTCTTCTCAAAACCAGACTCCAGAGCAGCTACAGGAGCGACAACATTTGATGGAATCTGTACCAAGTGCTAGCCAAATGGCAAATTCTTCTCACTACCAGACTCAAGAGCAGCCACTGCAGCAACAAAATGGGATGCAATTTGCACCAGGTGTTAGCCAAATGGCGTATTCTTCTCACAACCCAACTCAAGAGCCGCAACAGCAGCAACAACATGTGATGGAATCTTTACCAGGTGCTAGCCAAATGGCGAATTCTTCTCACTACCAGATTCAAGAGCAGCAACAAAATGGGATAAAATTTGCACCAGTTTCTAGCCAAACGGGGTATTCTTCTCCAAACCAGACTCTAGAGCTGCAACAGCAGCGACAAATGGAATCTGTACCAAGTGCTAGCCAAATGGCGAATTCTTCTCACTACCAGACTCAAGAGCAGCCACTGCAGCAACAAAATGGGATGAAATTTGCACCAGGTGTTAGCCAAATGGCATATTCTTCTCACCACCGCACTCAAGAGCAGCAACAGCAACATGTGATGAAATCTGTACCAGGTACTAGGCAAATGGCGAATTCTTCTCACTACCAGACTCAAGAGCAGCCACTGCAGCAACAAAATGGGATGAAATTTGCACCAGGTGTTAGCCAAATGGCATATTCTTCTCACCACCGCACTCAAGAGCAGCAACAGCAACATGTGATGAAATCTGTACCAGGTACTAGCCAAATGGCGAATTCTTCTCACCACCAGACTCAAGAGCAGCAACAGCAACATGTGATGAAATCTGTACCAGGTACTAGCCAAATTGCGAATTCTTCTCACCACCAGACTCAAGAGCAGCAACTGCAGAAACAAAATGGGATGAAATTTACACCAGTTGCTAGCCAAACACCGTATTCTTCTCAAAACCAGACTCCAGAGCAGCAACATGTTATGGAAGTTGCACCAGGTGCTAGCCAAATGGTGTATTCATCTAATTACCCGACTGTTCCCATGGTGGCTTCTGGAACACCTTCAATACCTGATTCCGTACTCCAACTTGCAAAGCAGCCAGAAAAACATTTCCACCATCAACAGAAGCAACAGAATCCACAGCAGCTTCAAATGATGTGGGAAAATCAAATGCAAGAAATTCAGCAAATTGTTGACTTTAAAAGCTTCACTATCCCGATTGGTCGTATAAAAAGGATAATGAAAGCTGATGAAGATGTCCGGATGATTGCACAAGAAGCTCTAGTTGTATTTGTAAAAGCATGTGAAATGGTCACATTAGAGCTGACTTTGCGATCTTGGATCCATGCACAAGAGAAGAAGAGGAATACACTACAAAAGAATGATATAGCAGCTGCTATTAAAAGCAATTATGCTTTTGATTTCTTGGAATATAGCATTCCATTTCCAAGTGGTAAGTTGAAAGAAAAAGCGGTTGTAATCGCAAATGATACTATTCCAATAATGGATCCTCCATCCGATCTGCCATATTATCATGGTCCACCACAGTACCCTGTAGGTCCTACAGGGATGATCATGGGAAACCCAGTTTCTCAAGCAGCACTAAATGCTACCCAGCAGCCTCAACTTCCTGTGCCTTTCATGCCATGGCTACATGCATACCCCCAGCAGCCTCAACCTCCTTTGCCTTTCATGCCATGGCCATATGaacatccccagcagcagcagcaacaaccgcaatag 3090 0.443 MDKSDQTQEQQQWQQNVMDFAPGASKMAYSSHYPTQGQQQNVMELAPGASQMVHSSHYQTQEQQQNGMEFTPGASQMAYSSYYLTQELQQNVMEFALGASQMAYHYPAQEQQRQQQNGMEFALGASQMAYSSHSPTQEQQQQLQNVMEFAPGASHMAYSSHFPTQEQQQQNVMEFAPDASQMVHSSHYQTQEQLQNVMEFASGASQMAYSSHYPTQEKQQNVIEFAPGPSQMAYSDHYPTQEQQQNVTESVPSASQMVNSSHYHTQEKHVMESVPGASQMVNSSHYQTQEMQLQQQNVMKFAAGVGKTAYSSHHPTQEQQHVMESVPGASQMSNSSHYQTQEQQLQQHNVMKFAPGVSQMAYSSHHPTQEQQHVMESVPSASQMVNSSHYQTQEQPLQQQNGMKFAPGVSQMVYSSQNPTQEPQQQQQHVMESLPGASEMANSSHYHTQEQQQNGMKSAPVASQMVYSSQNQTPEQLQERQHLMESVPSASQMANSSHYQTQEQPLQQQNGMQFAPGVSQMAYSSHNPTQEPQQQQQHVMESLPGASQMANSSHYQIQEQQQNGIKFAPVSSQTGYSSPNQTLELQQQRQMESVPSASQMANSSHYQTQEQPLQQQNGMKFAPGVSQMAYSSHHRTQEQQQQHVMKSVPGTRQMANSSHYQTQEQPLQQQNGMKFAPGVSQMAYSSHHRTQEQQQQHVMKSVPGTSQMANSSHHQTQEQQQQHVMKSVPGTSQIANSSHHQTQEQQLQKQNGMKFTPVASQTPYSSQNQTPEQQHVMEVAPGASQMVYSSNYPTVPMVASGTPSIPDSVLQLAKQPEKHFHHQQKQQNPQQLQMMWENQMQEIQQIVDFKSFTIPIGRIKRIMKADEDVRMIAQEALVVFVKACEMVTLELTLRSWIHAQEKKRNTLQKNDIAAAIKSNYAFDFLEYSIPFPSGKLKEKAVVIANDTIPIMDPPSDLPYYHGPPQYPVGPTGMIMGNPVSQAALNATQQPQLPVPFMPWLHAYPQQPQPPLPFMPWPYEHPQQQQQQPQ 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01777 1029 MobiDBLite consensus disorder prediction 521 541 - -
Car01g01777 1029 MobiDBLite consensus disorder prediction 439 505 - -
Car01g01777 1029 SUPERFAMILY Histone-fold 818 925 IPR009072 GO:0046982
Car01g01777 1029 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 758 997 - -
Car01g01777 1029 MobiDBLite consensus disorder prediction 626 646 - -
Car01g01777 1029 MobiDBLite consensus disorder prediction 629 646 - -
Car01g01777 1029 MobiDBLite consensus disorder prediction 361 396 - -
Car01g01777 1029 MobiDBLite consensus disorder prediction 317 344 - -
Car01g01777 1029 MobiDBLite consensus disorder prediction 683 727 - -
Car01g01777 1029 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 758 997 - -
Car01g01777 1029 MobiDBLite consensus disorder prediction 413 432 - -
Car01g01777 1029 MobiDBLite consensus disorder prediction 583 612 - -
Car01g01777 1029 Pfam Core histone H2A/H2B/H3/H4 819 917 IPR007125 GO:0003677
Car01g01777 1029 MobiDBLite consensus disorder prediction 680 727 - -
Car01g01777 1029 Gene3D Histone, subunit A 817 930 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01777 Car-Chr1 40999034 41004051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01777 832 961 CCAAT-HAP5 Transcription Factor Family AT1G56170 58.779 2.93e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Car01g01777 Histone 8e-14 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01777 K08066 - cam:101507861 1654.03