Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01753 ATGATGAACACAAAAACATGTTTTCTCACAACCACCTTAACAAATATATCATTTTTTTATGTAATTTTTTTCCTTCCAACACTTGTTTCATGTACCACAACATGCACATGTGACACAGAACAAACCAAACAAAATGATGAAAACAATAAAACCCTTCATTACAAACTTGGTTCAATTGCTTCTATCCTTATTTGCGGTGCTGTTGGTGTAAGCCTACCATTATTAAGCAAAAGAGTTCCAATTCTAAGTCCTAATAATGACTTATTTTTCATGATTAAAGCCTTTGCGGCAGGGGTGATTTTATCAACCGGTTTCATTCACATACTTCCGGAAGCATTTGAGAAATTGAATTCACCTTGTCTTAAGGAAAATATTTGGGGGAATTTTCCATTTGCTGGATTTGTTGCTATGTTGTCTTCAATTGCTACTTTGATGGTTGATTCATTTGCTAGTGGCTATTATCATAGGCAACATTTTAATAATAATAACCTTTCAAAACAAGTTCCTCATGATGATGTTGAAATTGGAGGTAATGAACATGTTGGTCATATAcatgttcatacacatgctacacatggtcatgctcatgGATCAACTAATTCTTCTCATGATTCAATTTCATCTGAATTAATTAGGCAACGTATCATATCACAAGTGTTGGAGCTAGGAATTGTGGTCCATTCAGTGATTATTGGAATATCTTTAGGCACTGCACAGAGCATTGATACCATTAAGCCTCTCCTAGTGGCTTTGTCTTTCCATCAATTTTTTGAAGGAATGGGGCTTGGTGGTTGCATATCTCAGGCAAAATTTGAGTCTAGGTCTACAACAATTATGGCAACATTTTTCTCCCTAACAACACCAATTGGGATAGCAATTGGGATAGCAGTATCAAGTGTATACAAAGAGAATGATCCAACTTCTTTAATTGTTGAAGGGGTTTTCACTTCTGCTTCAGCTGGAATTTTGATTTACATGGCATTAGTTGACCTACTTGCAGCAGATTTTATGAGCCCAAGGTTGCAAAACAATTTGAAAATGCACTTTGCAGCAAATATTTCACTTCTTTTAGGTGCAGGTTGCATGTCATTGTTGGCCAAGTGGGCCTAA 1110 0.3459 MMNTKTCFLTTTLTNISFFYVIFFLPTLVSCTTTCTCDTEQTKQNDENNKTLHYKLGSIASILICGAVGVSLPLLSKRVPILSPNNDLFFMIKAFAAGVILSTGFIHILPEAFEKLNSPCLKENIWGNFPFAGFVAMLSSIATLMVDSFASGYYHRQHFNNNNLSKQVPHDDVEIGGNEHVGHIHVHTHATHGHAHGSTNSSHDSISSELIRQRIISQVLELGIVVHSVIIGISLGTAQSIDTIKPLLVALSFHQFFEGMGLGGCISQAKFESRSTTIMATFFSLTTPIGIAIGIAVSSVYKENDPTSLIVEGVFTSASAGILIYMALVDLLAADFMSPRLQNNLKMHFAANISLLLGAGCMSLLAKWA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01753 369 TIGRFAM zip: ZIP zinc/iron transport family 37 369 IPR004698 GO:0005385|GO:0016021|GO:0071577
Car01g01753 369 Pfam ZIP Zinc transporter 53 366 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Car01g01753 369 PANTHER ZINC/IRON TRANSPORTER 18 369 - -
Car01g01753 369 PANTHER METAL TRANSPORT PROTEIN 18 369 - -
Car01g01753 369 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01753 Car-Chr1 40401215 40403989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01753 2 369 Inorganic Solute Cotransporters AT3G12750 60.270 1.51e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01753 K14709 - gmx:100805124 503.442