Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01749 ATGATGGCGGCACTGAAGATTAGTGGCAGCATGAGCACCGCACTCCGATCATCGAACTATCTCCTCTCCGCTAAGTTCCTCATGCAAATTCATTTCACTCGCAAGATGAGCACGGATGCACATAGTATTGCCTCTCAACTTAACAATTCTGGGCTGTTGAGGACTCAAGGACTCATTGGAGGGCAATGGAGGGATGCTTATGATGGGAAAACCATAAAGGTTTATAATCCAGCAACAGGTGAACCTATAGCAGATGTAGCATGCATGGGTGGAAGAGAAACAAATGATGCAATTTCCTCTGCTTTTGATGCATTTAGATCATGGAGCAAAATCACTGCTGCCGAGCGAAGCAAATTTCTGAGGAAATGGTATGATTTGCTAATGGCACATAAAGAAGAGTTAGCACAGCTCATAACCTTGGAGCAAGGAAAGCCTCTTACAGAGTCTATGGGTGAGGTAAATTATGGTGCTGGCTTTATTGAGTTTGCATCAGAGGAGGCCAAACGTATATATGGGGATATAATTCCTGCACCTCTATCTGATCGGCGGTTATTTGTTTTAAAGCAACCTGTAGGGGTTGTAGGTGCAATTACACCTTGGAACTTTCCCCTTGCTATGATTACCCGAAAGGTTGGTCCAGCACTTGCATGTGGATGTACAGTGGTCATAAAGCCCTCTGAACTTACGCCTCTGACTGCTTTAGCTGCAGCAGAACTCTCTATTCAAGCTGGAATACCTGCGGGTGTTGTGAACGTGGTTATGGGAAATGCTCCTGATATTGGAGACGCTTTAGTTGCTAGTCCACAGGTAAGGAAGATTACATTCACTGGCTCGACGGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCTGAGACGGTTAAAAAAGTATCTCTGGAACTTGGTGGCAATGCGCCTTGCATAGTTTTTGATGATGCTGACCTGGATGTTGCAGTGAAAGGAACACTTGCAGCCAAGTTCCGTAATAGCGGACAAACATGTGTTTGTGCAAATAGAATTCTCGTGCAAGAAGGTATATATGACAAATTTGCAAATGCATTGCTTGATGCTGTTCAGAGTATGAAAGTTGGAGATGGTTTTAGTGAAGGTGTGGCTCAGGGCCCTCTGATCAATGAAGCTGCTGTCAAAAAGGTTGACTCCTTGATTCATGATGCTACATCAAAGGGGGCAAAAGTAATTCTTGGTGGTAAAAGACATAGCCTTGGATCAACTTTTTATGAACCAACAATCATCAGTGATGTCGACAATGAGATGCGTATATCAAGAGAGGAAGCATTTGGACCTGTCGCACCCCTTTTGAGATTCAAAACTGAAGAGGATGCTATCAGAATTGCTAACGACACAAATGCAGGCTTGGGTTCATACGTATTTACAAACAGTATCCAACGCTCATGGCGTGTGGCTGAGGCTCTTGAATACGGACTTGTCGGTGTTAATGAAGGAGTAATTTCAACAGAGGTGGCTCCATTTGGTGGATTTAAACAGTCAGGCCTCGGAAGAGAAGGTTCCAAATATGGGATGGATGAATATTTGGAGATCAAGTATGTCTGCCTGGGAAACATGAACAAAGATTGA 1593 0.4394 MMAALKISGSMSTALRSSNYLLSAKFLMQIHFTRKMSTDAHSIASQLNNSGLLRTQGLIGGQWRDAYDGKTIKVYNPATGEPIADVACMGGRETNDAISSAFDAFRSWSKITAAERSKFLRKWYDLLMAHKEELAQLITLEQGKPLTESMGEVNYGAGFIEFASEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDALVASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRILVQEGIYDKFANALLDAVQSMKVGDGFSEGVAQGPLINEAAVKKVDSLIHDATSKGAKVILGGKRHSLGSTFYEPTIISDVDNEMRISREEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMNKD 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01749 530 CDD ALDH_F5_SSADH_GabD 74 524 - -
Car01g01749 530 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Car01g01749 530 SUPERFAMILY ALDH-like 48 528 IPR016161 GO:0016491
Car01g01749 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 302 491 IPR016163 GO:0016620
Car01g01749 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 69 516 IPR016162 GO:0016491
Car01g01749 530 Pfam Aldehyde dehydrogenase family 63 522 IPR015590 GO:0016491
Car01g01749 530 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 50 527 - -
Car01g01749 530 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 298 305 IPR029510 GO:0016491
Car01g01749 530 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 50 527 - -
Car01g01749 530 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 74 520 IPR010102 GO:0009013|GO:0009450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01749 Car-Chr1 40316275 40328776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01749 34 529 Aldehyde Dehydrogenase Gene Family AT1G79440 79.839 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01749 K17761 - gmx:100808318 919.842