Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01743 ATGGCTCCAATGACTCTACCACCTGGATTCAGATTCCACCCTACAGATGAAGAACTTGTTGCTTACTACTTAGAAAGAAAAATAACAGGTAGAACTATAGAGCTTGATATCATTGCTGAAGTTGATCTCTACAAATGTGAACCTTGGGATTTACCAGAAAAATCATTTCTTCCAAGCAAGGATATGGAGTGGTATTTTTATAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGGACTAATAGAGCAACAAGAGGTGGTTATTGGAAAGCAACTGGAAAAGATAGGGCAGTGAACTCTCAAAAGAGACAAGTTGGAATGAAGAAGACACTTGTTTATTACAAAGGTAGAGCACCTCATGGTATTAGAACAAACTGGGTTATGCATGAATATCGCCTCATGGAATCACATCCTGGTGCTTCTCTTTCATCTTTAAAGGATTCATATTCATTGTGTCGAATTTTCAAGAAGACAATTGAAATTCCAACAAAACTTAAAGAAAATCAAGAACAATTAGAGGACACAAAGAAGGAACAAGGGCAAGGTGAAGATTCAAGTGGCACTGAAATTTCAAGAGAAATGGAAAATATGGATCATGAGAAAGTTCTTAATAATCATGAACATCCAAAATTTCCATGTGATGCTTCTTCTTCTGATGTCACTCAAGGAACATACACACCAACAAATACATGTAATAATATAACCGATGATTTTCAACCACAATTTGCTTGTGATGAAGCAAATAGTGCATCTATTTCTTATCCAATGGGCATAGGCTACCCCTCAAATATATTTCAGGATATAGAAATACCTATGTATGGTGGTTTCCATAATCATATTCCAGAAGCACCTTTTATGATGGAAGATTTACCACAAATAAACATAATGGATACAAAGTCAACATTAATGAAGCCTGAAATGATAATCACTGATGACTGCATTTTGTATGACAGATACAGAGATTGTATGAATGGAACACTAGAAGAAATAATCTCTTTGTGTTCTTCTCAAGATCATTCTATGGCTTTTCCAATGCTATAG 1041 0.3535 MAPMTLPPGFRFHPTDEELVAYYLERKITGRTIELDIIAEVDLYKCEPWDLPEKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRAVNSQKRQVGMKKTLVYYKGRAPHGIRTNWVMHEYRLMESHPGASLSSLKDSYSLCRIFKKTIEIPTKLKENQEQLEDTKKEQGQGEDSSGTEISREMENMDHEKVLNNHEHPKFPCDASSSDVTQGTYTPTNTCNNITDDFQPQFACDEANSASISYPMGIGYPSNIFQDIEIPMYGGFHNHIPEAPFMMEDLPQINIMDTKSTLMKPEMIITDDCILYDRYRDCMNGTLEEIISLCSSQDHSMAFPML 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01743 346 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Car01g01743 346 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Car01g01743 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 194 - -
Car01g01743 346 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Car01g01743 346 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Car01g01743 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 194 - -
Car01g01743 346 MobiDBLite consensus disorder prediction 166 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01743 Car-Chr1 40175098 40179309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01743 1 332 NAC Transcription Factor Family AT1G54330 50.450 1.95e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car01g01743 NAM 4.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01743 - - gmx:100808325 560.066