Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01741 ATGAATCACCCACAGCCAACACCGTCACTTTCCGCCGTGAAGACTCGCTGCACCGGTTGCCGCGCGTACTTTCACGCGGCGCAGGGTGTTACGGAGTTACCATGTCCTCAATGTCAAATGCCGCATTACTTCGCCTTCGATCCGTCTGCTGCGAGGATTCGATGTCCCGCTTGTAAGGCAGTTGTGAACGGACCTAGTAATCTTTCGAAGTTCCCGTGTCCTCAGTGTCGCGTTGAGCTTGATGTTCATGTAGATGGTGACGATGTCAACGAGCTGGTTAATGAAGTGGAGCAGGATGAAGATGATGGTGGTATGGCTGGAGAAACATTTACAGATTATCGACCAGCAAAGATATCTATTGGACCTCCGCACCCAGATCCAATTGTGGAGACATCTTCCTTGTCTGCAGTGCAGCCACCCGAGCCTACTTATGATCCCAAGATTAAGGATGATTTGGAATGTTCAAAAACTTTGTCATGCTTGCAGATTGAGACTTTGGTTTATGCTTGTCAGAGACACCTTCAACACATTCCCAATGGTGATAGGGCAGGATTCTTTATTGGAGATGGAGCTGGTGTAGGTAAAGGTCGAACAGTTGCTGGTCTAATTTGGGAGAACTGGCACCACGGGAGGAGAAAAGCGCTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCCCGAAGAGATTTGGATGATATGGGTGCAAGTTGCATTCAGGTGCACGCTTTGAATAAACTGCCTTATTCTAAGCTTGAATCAAAGTCTGTTGGAGTTAGGGAGGGAGTTATTTTCTTGACATACAGTAGCCTCATAGCATCATCTGACAGAGGTCGTACCCGTATTCAACAGCTTGTGCAGTGGTGTGGACCAGGGTTTGATGGTCTTATAGTTTTTGATGAGTGTCATAAAGCAAAAAATTTGGTTCCCGAAAAGGGTAAGCAGTCAACAAGAACTGGTCAAGCAGTACTTGATATCCAGGCTCAACTACCTGAAGCTCGTGTTGTTTATTGCTCAGCTACTGGTGCTTCTGAACCTCGCAATATGGCTTATATGGTTCGGCTTGGCCTTTGGGGAGCTGGGACTTATTTCCGTGATTTTGGTGAATTTCTAGGTGCTCTTGAAAAAGGGGGTGTTGGAGCTCTAGAACTAGTTGCAATGGACATGAAAGCAAGGGGGATGTATTTATGTCGTACCCTTAGCTACAAGGGTGCTGAGTTTGAAATTACTGAAGCACCATTGGAAGATAAAATGATGGACGCTTATCAAAAGGCTACAGAAATTTGGGTAGATTTGCGTAAGAAATTGCAGTCTGCCATAGCCTTCCTACCCGACAAACCTAATAGTAGACAACTATGGAGATTATACTGGGCAAGCCACCAGCGCTTCTTTAGACACTTGTGTATGTCTGCTAAAGTCCCTACTGTGGTGAGACTGGTGAAACAAGCATTAATGGAAGATAAGTGTGTAGTCATAGGTCTGCAGAGTACGGGGGAAGCAAGGACGGAGGAAGCTGTTTCAAAATACGGCTTTGAACTTGATGACTTTGTTTCTGGACCTCGTGAGTTGCTGCTAAAATTTGTTGAAGAAAATTACCCATTGCCGAAAAAGCCTGAACTTCCCCCAGATGATGGTGTAAAGGAGCTTCAAAGGAAGAGGCACTTGGCAAGTCCCGGCGTTTCAGCAAAATCTAGAGCCAGAAAAGTAGCTAAGTGGCAGCCTCCTAGTGATGCTGAAAGTGATGAAGAATCTGAAAGTGCTGCCTCTGCTCCTGAATCTTCTGATTCGGATTATGGACCAGAAGGGGATGAAAGTGCTGCCTCTGGTCTTGAATCTTCTGACTCTGATTATGATGAGTTTCAGAAATGTGAAATTTGCAGTACTGAAGAGGAAAGGGAAAATTTGTTGCAATGTTCCCTCTGTGGTAAATTTTCTCATCAATCATGCTTGGTGCCTCCAATTGGCAATTTTGTTCTCAAAGAATGGGCATGTCATTTGTGCAAGGATAAAACCGATGAATATCTCCCTGGAACTAACATGATTGAACTCCAGAAGAGTTATGAAACAGCCATGGATTGCAAGAATAAAATATTAGAGATGATTCGTGCTTTGGATCTTCCAAACAATCCCTTGGATGATATTATTGACCAGTTAGGAGGCCCTGACAAAGTTGCAGAGATTACTGGAAGGAAAGGAATGCTTGTGAGGGCCTCTAGTGGAATGGGTGTGGTTTATAAAACTCGAAATACAAAAGATGTCTCTGCCGAGATGGTCAACATGCATGAAAAACAGCTCTTTATGGAAGCTAAGAAGTTAGTGGCTATTATCTCCGAAGCTGGATCAGCTGGAGTTTCATTGCAGGCAGATAGAAGAGTGAGAAATCAGAAAAGAAGGGTTCATGTAACTCTAGAACTTCCATGGAGTGCCGATCGAGCAATTCAGCAGTTTGGCAGAACTCATAGATCAAATCAAGTCTCGGCACCAGAATACAGGTTACTATTTACGAACCTTGGTGGAGAGCGCCGATTTGCATCAGCTGTTGCTAAGAGATTAGAATCCCTTGGGGCTTTGACTCAGGGGGATCGCAGGGCTGGACCTTCGTTAAGTGCTTATAATTATGACAGTGCTTATGGGAAGAGGGCTCTGATGAATTTGTACCGAGGAATAATGGAGCTGGAACCTCTTCCTGTTGTCCCTCCAGGATGCTTATCTGACAAACCAGATACAATTCAAGGTTTTATTATGCAGGCAAAAGCTGCTCTTGTTTCTGTTGGAATGTTTAGGGACACAATTCTTGGAGATGATAACGATCCTGGATGGTTATCTATCCACATTAATGATAATGATATGCATGATATTGGACGATTTCTCAATCGGATTTTGGGAATAGCTCCTGAGACTCAGAATAGGCTATTTGAGTTATTTTTGAATATCTTCGATCTTCTTATTCAAAAAGCTCGCATTGAAGGTAACCTTGATACAGGCATTGTTGACTTGAAAGCTAATGTCATTGAACTGCAAGGGACTCCAAAGACAGTCTATGTTGATCAAATGAGTGGGGCTTCAACTGTTCTGTTCACATTCATCTTGGATCGTGGAGTTTCATGGGAGTTGGCAAATACCATGCTGAATGAAAAGCAGAAGGCTGGACTTGGTTCATCGGGTGACGGCTTCTACAAGTCCAAGAGGGAGTGGTTGGGAAAACGTCATATTATTTTAGCATTTCAAGGTTCTGATTCGGCTATGTATAAGATAGTTCGTCCTGGTACTGGAGAATCACCTCGGGATATGCATCTGGCAGAATTAACAAGAAAATATTCAAGAGTTTCATCTTTAGAGGTTGCTCAAACTGGATGGGAAGATGATTACGAAGCTTCATCCAAACAGTGCATGCATGGTCCCAATTGCAAGCTTGGCAACTTTTGTACAGTTGGCTCAAGGCTACAGGAAGTAAATGTCTTAGGTGGCGTCATTCTTCCTGTTTGGGGAAGCATACAAATGGCTCTTTCTAAGCAGGCCCGGCAAATACATAAGAGGTTACGCATTGTTCGTGTTGAAACTACAACAGATGACAAACATATAGTTGGGCTTCTTGTCCCGAATGCAGCAGTTAAAACTGTGCTTCAAGGTTTCTTTCTTCCTCTCTCCTCCCTTACTACCTTCTCTTAA 3669 0.4385 MNHPQPTPSLSAVKTRCTGCRAYFHAAQGVTELPCPQCQMPHYFAFDPSAARIRCPACKAVVNGPSNLSKFPCPQCRVELDVHVDGDDVNELVNEVEQDEDDGGMAGETFTDYRPAKISIGPPHPDPIVETSSLSAVQPPEPTYDPKIKDDLECSKTLSCLQIETLVYACQRHLQHIPNGDRAGFFIGDGAGVGKGRTVAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDMGASCIQVHALNKLPYSKLESKSVGVREGVIFLTYSSLIASSDRGRTRIQQLVQWCGPGFDGLIVFDECHKAKNLVPEKGKQSTRTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTYFRDFGEFLGALEKGGVGALELVAMDMKARGMYLCRTLSYKGAEFEITEAPLEDKMMDAYQKATEIWVDLRKKLQSAIAFLPDKPNSRQLWRLYWASHQRFFRHLCMSAKVPTVVRLVKQALMEDKCVVIGLQSTGEARTEEAVSKYGFELDDFVSGPRELLLKFVEENYPLPKKPELPPDDGVKELQRKRHLASPGVSAKSRARKVAKWQPPSDAESDEESESAASAPESSDSDYGPEGDESAASGLESSDSDYDEFQKCEICSTEEERENLLQCSLCGKFSHQSCLVPPIGNFVLKEWACHLCKDKTDEYLPGTNMIELQKSYETAMDCKNKILEMIRALDLPNNPLDDIIDQLGGPDKVAEITGRKGMLVRASSGMGVVYKTRNTKDVSAEMVNMHEKQLFMEAKKLVAIISEAGSAGVSLQADRRVRNQKRRVHVTLELPWSADRAIQQFGRTHRSNQVSAPEYRLLFTNLGGERRFASAVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALMNLYRGIMELEPLPVVPPGCLSDKPDTIQGFIMQAKAALVSVGMFRDTILGDDNDPGWLSIHINDNDMHDIGRFLNRILGIAPETQNRLFELFLNIFDLLIQKARIEGNLDTGIVDLKANVIELQGTPKTVYVDQMSGASTVLFTFILDRGVSWELANTMLNEKQKAGLGSSGDGFYKSKREWLGKRHIILAFQGSDSAMYKIVRPGTGESPRDMHLAELTRKYSRVSSLEVAQTGWEDDYEASSKQCMHGPNCKLGNFCTVGSRLQEVNVLGGVILPVWGSIQMALSKQARQIHKRLRIVRVETTTDDKHIVGLLVPNAAVKTVLQGFFLPLSSLTTFS 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01741 1222 PANTHER OS08G0223700 PROTEIN 93 1211 - -
Car01g01741 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 766 869 IPR027417 -
Car01g01741 1222 SMART PHD_3 622 668 IPR001965 -
Car01g01741 1222 Pfam P-loop containing NTP hydrolase pore-1 123 423 IPR039187 -
Car01g01741 1222 Gene3D - 155 354 IPR027417 -
Car01g01741 1222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 575 674 IPR013083 -
Car01g01741 1222 Pfam PHD-finger 623 669 IPR019787 -
Car01g01741 1222 SUPERFAMILY FYVE/PHD zinc finger 610 672 IPR011011 -
Car01g01741 1222 MobiDBLite consensus disorder prediction 551 615 - -
Car01g01741 1222 Pfam C-terminal domain on Strawberry notch homologue 709 998 IPR026937 -
Car01g01741 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 366 IPR027417 -
Car01g01741 1222 ProSiteProfiles Zinc finger PHD-type profile. 620 670 IPR019787 -
Car01g01741 1222 PANTHER STRAWBERRY NOTCH-RELATED 93 1211 IPR026741 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01741 Car-Chr1 40083839 40112368 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Car01g01741 AAA_34 1.3e-132 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01741 - - gmx:100808670 1808.11