Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01738 ATGAAGCTCCACTACCTTTCATTGTTCCTTCTTGTGATCATCTTGGAGCTAAGCACCAATGTCTATGGTTTCTCATCACAACTTGTGACCAAAAAAACATTGAAGCCCTTATTATTACCACCCCCTGAGGCATTTCTTTCAATTGGTCACTATCATGCAACATGTCCAAATGCTGAAGGCATTATCTCACAAAAAGTTGCTGCTTGGATTAAGAAGGACCCCACTTTGGCCCCATCCATCATTCGCTTGCATTTTCATGATTGTGCAATTAGAGGATGCGATGCATCAATTTTGCTAAACCACAAAGGCAGTGAAAGAACTGCTTTTGAAAGCAAAACCTTAAGAGGATTCCAATTGATAGATGAAATAAAGTTTGAGCTAGAGAAAACTTGTCCAAGAACAGTTTCATGTGCTGACATTCTCACAGCAGCTGCAAGAGATGCAACAATATTTGCAGGAGGACCATTTTGGGAAGTACCATTCGGTCGAAAAGACGGTAAAATTTCACTATCAAAAGAAGCAAAATTGGTTCCACAAGGCCATGAAAACATAACAGGTTTACTGAATTTCTTTGAAGAAAGAGGACTTGACATGCTTGATTTGGTTACTCTATCAGGTTCACACACAATTGGTAGAACCACTTGCTATTCTGTTATGAACAGGATTTACAATTTCAATAATACTGGAAAACCTGATCCATCACTTAACATATATTACTTGAAACTTTTGAAGAAAAGGTGTAAACGTGATTTTGATATGGTGCATCTTGATGTTATAACTCCAAGGACTTTTGATACAACTTATTATACAAATCTTGTGAGGAAAGTAGGATTGTTGTCAACAGATCAGCTGTTGTTTTCTGATGAAAGGACAACTCCTTTTGTGGAGGCATTTGCAACACAGCCTTTTGTTTTTACTAGTCAGTTTGCAGTGTCAATGGTCAAGCTTGGAAATGTTCAAGTTTTGACTAGGCCTAATCAAGGTGAAATTAGAGTCAATTGTAATTATGTTAATGTTGTTTAG 1023 0.3734 MKLHYLSLFLLVIILELSTNVYGFSSQLVTKKTLKPLLLPPPEAFLSIGHYHATCPNAEGIISQKVAAWIKKDPTLAPSIIRLHFHDCAIRGCDASILLNHKGSERTAFESKTLRGFQLIDEIKFELEKTCPRTVSCADILTAAARDATIFAGGPFWEVPFGRKDGKISLSKEAKLVPQGHENITGLLNFFEERGLDMLDLVTLSGSHTIGRTTCYSVMNRIYNFNNTGKPDPSLNIYYLKLLKKRCKRDFDMVHLDVITPRTFDTTYYTNLVRKVGLLSTDQLLFSDERTTPFVEAFATQPFVFTSQFAVSMVKLGNVQVLTRPNQGEIRVNCNYVNVV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01738 340 Pfam Peroxidase 63 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601
Car01g01738 340 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Plant peroxidase signature 79 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Car01g01738 340 PANTHER PEROXIDASE 25-RELATED 33 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 CDD secretory_peroxidase 46 337 IPR033905 GO:0004601|GO:0042744
Car01g01738 340 Gene3D - 49 338 - -
Car01g01738 340 ProSiteProfiles Plant heme peroxidase family profile. 45 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PANTHER PEROXIDASE 33 337 - -
Car01g01738 340 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01738 340 Gene3D Peroxidase, domain 2 178 316 - -
Car01g01738 340 SUPERFAMILY Heme-dependent peroxidases 46 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01738 Car-Chr1 40066061 40067554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01738 41 338 Peroxidase AT1G30870 49.667 7.43e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01738 K00430 - gmx:100792775 548.51