Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01736 ATGGGTGATCAATCTGAGACAGTAGATTTGTTTGTTTCTCCTCCACCAATTGTCCCGAACACAACTACTATGTTACCACCTAGAACCAAAGGTCGTAAAAATCAATCGTTTGTTTGGAATGATTTCATAGTAGATCCTAACTTGGATGGGACATCTATTTGCAACCATTGTAGCAAGAAGCTCAAGTGTGATAATGGGACGAGTTCGATGATACAACATTCAAAGGGATGTAAGAAAAACCCCAATAGCGAGTTTAACAAAAGGAAGAGAACATTGGATGCAATGAATGTTGAAGGTCGTACTATTTCTTCCCCTTCAATGCCTAGgaacaaaTTAAAGTTTGTCAATTGGTTGATCACTCAGAACTTTAATTCATTTGATGCAACCAAATTAAAAGATTTGTTGAAAACTCGTTTGGATGAACTAATTATGGAGTATAGTGGTGTTGGAGAAGGATTCCAAAGTGAATCACAATCGACTGAATTTGATTTAAGTGGTAAGGAAGATCTTTATAGTTATAATAGATTTTTAATGAGCACTGGTTCGTCCTCTACTGAAAAGTCtgatttggaaagATTGAGAATTGACAAAACTGAGACTCTGACATTGAATAAGCTTTATGTTGATAAAAACTTGATTGAGGTTTTTGCTAAGGGTGTAGAGTAG 666 0.3483 MGDQSETVDLFVSPPPIVPNTTTMLPPRTKGRKNQSFVWNDFIVDPNLDGTSICNHCSKKLKCDNGTSSMIQHSKGCKKNPNSEFNKRKRTLDAMNVEGRTISSPSMPRNKLKFVNWLITQNFNSFDATKLKDLLKTRLDELIMEYSGVGEGFQSESQSTEFDLSGKEDLYSYNRFLMSTGSSSTEKSDLERLRIDKTETLTLNKLYVDKNLIEVFAKGVE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01736 221 SUPERFAMILY beta-beta-alpha zinc fingers 36 80 IPR036236 -
Car01g01736 221 Pfam BED zinc finger 38 73 IPR003656 GO:0003677
Car01g01736 221 SMART bed5 33 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01736 Car-Chr1 40003034 40005510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01736 186 220 Primary Pumps ATPases AT2G24520 68.571 3.70e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01736 K01535 - cam:101508098 223.402