Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01719 ATGCCTGATTTACCAGAGATGAATCACAAAATAACAGAAGAACCTCTTGAGAGACATCATAATGTTCACAGTTATCCAAATTCAGGAAACAATTCACCAACTCATCCAAAAAATGTGAATCCAGAAGAAAAATATGCATGCACATTGGAAGATTCAGCAAGTGAAGAAAAATTTGCAAAAAAAAATAAACCACAGAAACTAAATCCACCAAACAAAAACATTTCTGATTACAATACTTCAAGACAAAGTCCAAGAACAAGGATGCCTTCAAATTCTGAACCTGCAACTCCATCACCAGGATTACCAACAGGAGTTTCAAAGGGTATGCCTACTCATACAAAGGCGAACAATCACGGCACAGGAAGCGGAACAAGCTCACGCAGCGACAGTTTAGAGAGCACAAGTTGTTCACACATTAGGCCACATACTGGTGGTGATGTAAGGTGGGATGCAATTAACATGGTTTCCAAAGCTGGTCCTCTTAATCTAAGCCATTTTAGGCTTCTTAAGCGTATCGGTTACGGAGACATTGGAAGTGTGTACCTTGTGGAACTTAAAGGAACTGATGCTCATTTTGCTATGAAAGTAATGGATAAGGCTGCTCTTATAAGTAGAAACAAGCTTCTTAGATCACAGACAGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTTTTGCCTACTTTGTATTCTTACTTTGAAACTGATAAGTTTTACTGTCTTGTAATGGAGTACTGTAGTGGTGGCGATCTTCATTCGCTTCGACAGAAACAGCCGAATAAGTGTTTCACTGAAGAAGCTGCAAGGTTCTATGCTTCAGAGGTTTTGTTAGCTCTTGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTTTAGTTAGGGACGAAGGACATATCATGCTCTCGGATTTCGATTTATCGCTTCGCTGCTCCGTCAGTCCTACACTTGTCAAGTCATCCTCTACAAATGTAGGAAACAGCGGAAACGGTAGTGATTCTGGAGGTGTGTTTAATGATGACCAAGCAGTTGGAACTGCTCAGACATCATCAAGCTTTTTCCCTCGCATTTTGCCTTCGAAGAAGAATCGAAAGGCAAAATCAGACTTTGGCCTATTGGTTAACGGAAACCGCCTTCCAGAACTAATGGCAGAACCAACAAATGTGAGATCAATGTCATTTGTAGGAACACATGAGTATCTAGCTCCTGAAATAGTCAAAGGAGAAGGACATGGTAGTGCAGTAGATTGGTGGACTTTTGGAATCTTCTTGTATGAATTGTTACATGGAGCAACACCTTTTAAAGGTGCAGGATACAAAGCAACACTTTTCAATGTTGTTGGACAGCCACTGAGGTTTCCAGATAGTCCTCAAATTAGTACCGTGGCGCGCGATCTTATTAGAGGATTGCTTGTGAAAGAACCTCAGAAGAGAATTGCTTATAAAAGAGGTGCAACCGAAATAAAACAACATCCATTTTTTGAAGGAGTGAATTGGGCTCTAGTTAGAAGTGCATCACCACCACATATACCAGATGTCATAGACTTTTCAAAGTATGCTAAAAAAGAGACAGCACCACCACCAGTTGATAAGAAGATAGCAGATGTTGCTGCTAGTGATACAAAAAGCAAAAATGCTACTGATTCTTATGTAGATTTTGAGTATTTTTAG 1686 0.4009 MPDLPEMNHKITEEPLERHHNVHSYPNSGNNSPTHPKNVNPEEKYACTLEDSASEEKFAKKNKPQKLNPPNKNISDYNTSRQSPRTRMPSNSEPATPSPGLPTGVSKGMPTHTKANNHGTGSGTSSRSDSLESTSCSHIRPHTGGDVRWDAINMVSKAGPLNLSHFRLLKRIGYGDIGSVYLVELKGTDAHFAMKVMDKAALISRNKLLRSQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEYCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSTNVGNSGNGSDSGGVFNDDQAVGTAQTSSSFFPRILPSKKNRKAKSDFGLLVNGNRLPELMAEPTNVRSMSFVGTHEYLAPEIVKGEGHGSAVDWWTFGIFLYELLHGATPFKGAGYKATLFNVVGQPLRFPDSPQISTVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSASPPHIPDVIDFSKYAKKETAPPPVDKKIADVAASDTKSKNATDSYVDFEYF 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01719 561 SMART serkin_6 166 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01719 561 Gene3D Phosphorylase Kinase; domain 1 164 249 - -
Car01g01719 561 SUPERFAMILY Protein kinase-like (PK-like) 154 518 IPR011009 -
Car01g01719 561 MobiDBLite consensus disorder prediction 66 99 - -
Car01g01719 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Car01g01719 561 MobiDBLite consensus disorder prediction 6 21 - -
Car01g01719 561 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 40 561 - -
Car01g01719 561 MobiDBLite consensus disorder prediction 48 63 - -
Car01g01719 561 CDD STKc_phototropin_like 164 520 - -
Car01g01719 561 Pfam Protein kinase domain 167 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01719 561 Pfam Protein kinase domain 373 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01719 561 Gene3D Transferase(Phosphotransferase) domain 1 374 517 - -
Car01g01719 561 MobiDBLite consensus disorder prediction 23 38 - -
Car01g01719 561 Gene3D Transferase(Phosphotransferase) domain 1 250 319 - -
Car01g01719 561 PANTHER FLIPPASE KINASE 1-RELATED 40 561 - -
Car01g01719 561 MobiDBLite consensus disorder prediction 1 142 - -
Car01g01719 561 MobiDBLite consensus disorder prediction 109 140 - -
Car01g01719 561 ProSiteProfiles Protein kinase domain profile. 166 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01719 Car-Chr1 39217973 39221643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01719 131 561 AGC Kinase Gene Family AT1G79250 70.419 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car01g01719 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01719 - - gmx:100784301 809.675