Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01712 ATGATGCAGGGAAGTGGACAGTTAACAGTTCCACCAGGGTTCAGGTTTCACCCTACTGATGAGGAGCTTCTTTACTATTACCTAAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTTATCAGAGAAGTTGATCTTAACAAACTTGAACCTTGGGATCTCAAAGAGAAATGTAGGATAGGATCAGGGCCACAGAATGAGTGGTATTTCTTCAGCCATAAAGACAAGAAATATCCAACAGGAACAAGAACAAACAGAGCAACTACAGCAGGGTTTTGGAAAGCTACAGGAAGAGACAAAGCAATATACCACACAAATTCCAAAAGGATTGGAATGAGGAAAACCTTAGTCTTCTACACTGGTCGTGCTCCTCATGGCCACAAAACTGATTGGATCATGCATGAGTACCGCCTTGACGACAATGATGCAGAAGTTCAGGAAGATGGATGGGTGGTTTGCAGAGTATTCAAAAAGAAAAATACAAGTAGAGGCTACCAACAAGAAATTGAAGAAGAAGATCACATAATGAACCATATGAGAACAACAAATGCTCCATGCCATAATAATATTCTAGaaccaaaacatcatcatcacaagcaacaacaacaaggattactatatgattacaacaacaataacaaTAGCTTTGATGCTACAATTCATCTACCACAGTTATTCAGTCCAGAATCAGCTGTTCCACCACCACCACCAACTTCATTTCCTTCATCCATGGACATCCTTGAATGCTCTCAAAACTTGTTGAGGCTCACAACTCCTGCATTTTCTGGACTCAATCTCATGCAACAACAAGGAGAGAGGTTTCATGGTGATTGGTCATTCTTGGATAAACTACTTGCATCTCATAATGGCATTGATCATCATCACACTTTAAGAAACAAATGTAATACTAATAATCAGCATGGTGCAGCACCTTCTGTTGAAACTTCAGCTCACAAATTTCCATTTCATTACCTTGGTTGTCACTCTCATCATGATATTATGAAATTTTCAaagtaa 1020 0.3667 MMQGSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGHKTDWIMHEYRLDDNDAEVQEDGWVVCRVFKKKNTSRGYQQEIEEEDHIMNHMRTTNAPCHNNILEPKHHHHKQQQQGLLYDYNNNNNSFDATIHLPQLFSPESAVPPPPPTSFPSSMDILECSQNLLRLTTPAFSGLNLMQQQGERFHGDWSFLDKLLASHNGIDHHHTLRNKCNTNNQHGAAPSVETSAHKFPFHYLGCHSHHDIMKFSK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01712 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 320 - -
Car01g01712 339 PANTHER PROTEIN SOMBRERO 6 320 - -
Car01g01712 339 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Car01g01712 339 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Car01g01712 339 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Car01g01712 339 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01712 Car-Chr1 38951809 38954796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01712 2 339 NAC Transcription Factor Family AT1G79580 53.826 5.12e-115 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car01g01712 NAM 3.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01712 - - adu:107458804 501.13