Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01704 ATGAATACAGAGGGATGTGGTTTGTCTTCCACTCACTCCACTATTCCTCTTCCCTGCATTGATAAACTTAAGGAAGAGTTTTCTTGCTCCATTTGTTTGGATATATTTTTTGAGCCAACCACTACTTTTTGTGGTCACACCTTTTGTAGAAAATGTTTTCTATCTTGCATAGACAAGTATACACTAGGGTTTACGTGCCCCCTCTGCAGACAACAGATAAGAATAGAAGAATCTTGTCATGTGTACATAGTTTTGTGGAACACAATACAACTATTGTTTCCTCATGATGTTGAAAAGAAAGCAATTATTGCTTCACAAGAAGCTCATAATATGGAAATATGTGAAGAAAATACACATTCTTTGAGATTAATTTCAACAGAAAACATGCCCATGGATTTTTATCTGGAATTAGTGGCGATACTTCGGCTTGAAGCATGA 438 0.3607 MNTEGCGLSSTHSTIPLPCIDKLKEEFSCSICLDIFFEPTTTFCGHTFCRKCFLSCIDKYTLGFTCPLCRQQIRIEESCHVYIVLWNTIQLLFPHDVEKKAIIASQEAHNMEICEENTHSLRLISTENMPMDFYLELVAILRLEA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01704 145 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 101 IPR013083 -
Car01g01704 145 PANTHER UNCHARACTERIZED 13 112 - -
Car01g01704 145 SUPERFAMILY RING/U-box 21 93 - -
Car01g01704 145 ProSiteProfiles Zinc finger RING-type profile. 29 70 IPR001841 -
Car01g01704 145 Pfam Zinc finger, C3HC4 type (RING finger) 29 69 - -
Car01g01704 145 PANTHER OS12G0267900 PROTEIN 13 112 - -
Car01g01704 145 SMART ring_2 29 69 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01704 Car-Chr1 38467528 38468685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01704 21 73 C2H2 Transcription Factor Family AT5G39550 44.643 1.71e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01704 - - cam:105851291 268.47