Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01694 ATGGAATCAAAAGGTGGAGAAGTTAGAAGGCTTCACATAATTTACTTCCTTAGTCACATGGGTGGTCATGCTGAGCATCCTCATCTCATTCGTGTTCTTCATCTAGCTCGAAATGGTGTTTTTCTTAGAGATATTAAGAGATGGCTTGGTGAATTGAGAGGAAAAGATTTGCCTGAATCCTTTGCTTGGTCCTACAAGAGGAGGTACAAGAGTGGATATGTGTGGCAGGACTTAATGGATGACGACCTCATAACCCCAATTTCTGATAATGAATACGTCCTCAAAGGATCACAAATCCATACTACCCCTTTTGAAACTCATTCAATTAATGAAAAGAAAGCTGATACTGATGTACTGACAGAGAAGAAATCTTGTCAAGTACAAGTTGAAGAGGACAAACAAAAGAACCAAAAGCAGAAGCCATCTCTATCAGAAGAAGAATCTCAAATTCAGCAAGAAAAAAATGATTCAGAAAAGAATAAACTAAATCAAGTGTCCTCAGAAATCAGCCAGGATTCATTGGTTTTCAGTTCAGACAGATCATCAGTGACAGATGATGAAACTTCTAAAGTTGAAGAAGAGAAGCTTTTAATCAAAGAGGGTAACAATGAAAAGAGCAATGAGAAGTTTGAGGCTTTTTCATTTCCTTCTTTGTATCACAATTTGATGAGTAAAAAGGGTAAAAAAGATGGACACAACAAAATTGATACACCTCCTGAttcgtctttttcgactccttcatcatcttcttctCAATCCTCTTTCAGTAAGATTAGAAGCAATTCTACTAGAGTTACTAGTGTGTTCCGCAACTTGATTAGTTGCGGAACTGTGGAAACAAATGACGCTTCTTTGATCCTAAGGAACACTGCTCACAAAATTGTCCCTAAAGAGCCTAACAATATGCTTGCAAAAGGGGGTGAGATTTGTAAAGAAGACAAATTGGGAGGATCAGCCAGGTGTTTTGGGACTCCTTGGAATTATCATGACCAAAATGAACATTATGGATCAGCCAGAAAAAGCTGTGATGCAGAGGAACCAAACAGGAGCAGAAAAAAGCTAAGCGAGTTATTGAATCAAACTCCTTGTAAACCATTTGGAGGACCAGTTTGCTCGCAATGTGGGAAATCATTCAAGCCTGAGAAAATGCACAAACACATGAAGTCTTGTAAAGGAATCAAAGGAATGGGAACATCAGGTGCAACAACTATTGCTGAGGAATCATCAAAGCTTCAGAGATCAACTTCATCTTGTAGAGATTACCTTTTGCAAAATTAA 1278 0.3717 MESKGGEVRRLHIIYFLSHMGGHAEHPHLIRVLHLARNGVFLRDIKRWLGELRGKDLPESFAWSYKRRYKSGYVWQDLMDDDLITPISDNEYVLKGSQIHTTPFETHSINEKKADTDVLTEKKSCQVQVEEDKQKNQKQKPSLSEEESQIQQEKNDSEKNKLNQVSSEISQDSLVFSSDRSSVTDDETSKVEEEKLLIKEGNNEKSNEKFEAFSFPSLYHNLMSKKGKKDGHNKIDTPPDSSFSTPSSSSSQSSFSKIRSNSTRVTSVFRNLISCGTVETNDASLILRNTAHKIVPKEPNNMLAKGGEICKEDKLGGSARCFGTPWNYHDQNEHYGSARKSCDAEEPNRSRKKLSELLNQTPCKPFGGPVCSQCGKSFKPEKMHKHMKSCKGIKGMGTSGATTIAEESSKLQRSTSSCRDYLLQN 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01694 425 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 3 416 IPR010369 -
Car01g01694 425 MobiDBLite consensus disorder prediction 128 161 - -
Car01g01694 425 MobiDBLite consensus disorder prediction 128 202 - -
Car01g01694 425 PANTHER F3F20.2 PROTEIN 3 416 - -
Car01g01694 425 Pfam Protein SOSEKI, plant 12 301 IPR010369 -
Car01g01694 425 MobiDBLite consensus disorder prediction 162 182 - -
Car01g01694 425 Coils Coil 143 163 - -
Car01g01694 425 MobiDBLite consensus disorder prediction 183 202 - -
Car01g01694 425 MobiDBLite consensus disorder prediction 237 257 - -
Car01g01694 425 MobiDBLite consensus disorder prediction 224 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01694 Car-Chr1 37993953 37997794 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car01g01694 DUF966 3.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01694 - - aprc:113855595 521.931