Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01660 ATGGAAAACCaccaaaaccaaaacaaaaacccaaaccaagacctagagaaccaacaccaCCAACAAGTTTGGGGCACGTGGGAAGAGCTTTTACTAGCGTGCGCCGTCAACCGCCATGGCTTCAAAGACTGGGATACCGTCGCCATGGAGGTTCAGTCACGAACCAACCGTCCAACGCTTCTCGCTACCGCACACCACTGCGAACAAAAATTTCACGATCTAAACCGTCGATTCATCGACGACGTTCCGCCGCCGCAACAGAACGGAGACGCCGACGGCGTCGACTCCGATCACGTCCCTTGGCTCGATAAATTGCGGAAACTCCGCGTTGCCGAGCTCCGGCGTGATGTCCAACGCAGCGATGTCTCCATTTTGTCGTTGCAGTTACAGGTTaagagattagaggacgagaaagcgaaagagaatgacggaaaagaaaATAAGAAACCAGATCTGGTGGTTTCCGACGAGGAACAGCGGCCGGAAAACGAAAAAACCGGTAGAGAAATGGAAGAAACTGAACCGGCTAATTCTGAACCGGATATTCGTCGGCTCGATGAAAGCACAACAAACACAGATAATAAACTGTTACCAACAACGGGAGAGGAATCGGACCGGGATAATCAATCGGTTAATGAGTCCAACTCAACCGGTTCGAGGTTCGATGCAGTGAAAACCGGTGAGGTTGACATAAAGTTAAATTCCGGTCCAGTTCCGGTTCATTCGGGTCCAAACGAACCGGTGCAAACCGTTAGAAAGAGAAAATCAGTTGAGGAGGAATCAAATAACGGAAGCTATGATAATGAGGCTAAAGTTCTTACGTGCGAGTCGGTGCCTCCGAGTGAAGAGAGGAAAGTGGAGGGTGACTCGTCCGAGTTACATGACTCGGTGACTCATTCGGGGGAGAGATGTGCGAGAGAGAGTAGCGAGGTGCAGAGTTCTACTAGTTTGACGAAGCGGAAGAATAGACTACGGAGGCAGAAGGCTTCCGGCGGAGACGTTATGCCGGAGAATGAGGAGGTTGCGAGGGTGAAATCAGAACCGTTGGTTGGCTTGTTGGAGATGATCAAAGGACATGAGAATTTTTCATTGTTTGAGCGCCGTCTTGCAAGCCAGCATGATTTGAATAGATACAAAGACATCGTGAGACAGCACGTGGACTTGGAAACCATACAATCAAGACTCCAAAATGGTCACTATTCCTCATGCACTACCGCATTCTTCCGCGACCTTCTCCTCCTCTTCACCAACGCCGCCGTGTTCTTTCCTCATGATTCCACCGAATCACGGTTGGCGCAGCAGCTGCACCGCCTTGTTGTTGCCGAGACTAAAAGCAACAGCCAAGCACAATCCGACCCTATCACCCAAAAAACCGATTCACACCCTCCAAACGCACCACTATCTAAACCAGATTCTCTCCTTTCCAAGCACAAAGCCTCTGCTCCTATATTAGTTTGCCGCAAACGCAGTTCAATCTCTGTAAAACCTTCCACAACAACCATTGGCCAAAAGGGTGATCAACAACCCATCATCAATGACAAGAAGGAAAAGCCATCTTCTGATGTGAAACAATCATTGAAACCAAGTTATTCTGAGTCAGACGAAGAGGAGCCTCCTAAGGCAAAGGAAAAGCCTGTCACTGGAGCTAGAAGCAGAAGAAGCAACAAGAATCTCAACAGTAACACTGGCAATAAGAAACTACCCTCTAACTCCACTCCTAAAACAGGGTCCTCGGGGAATAAGCCCGCCGAGGCCACAAAATCGGAGAAGAACAGAGCAGAGGGAGTGTCAGACAAGAAGAAAAACGCCGCCGCCGATTTCTTGAAGAGAATAAAACGAAATGCATCggtggaggtgttgagaagtggtggtggtggagggggaagtagtggtagcagcaagggtggtggaagtagtGCTAGTATGAAAGAGCAGAAGAAAACGGTGAATAATGGAAAAGGGGAGAAAGGGAAAGAAAGGGCTTCAAGGTACAACGATGGAGGAGGGTCAGGTTCAGGTGATAAGAGGAATAGGACTATTGAGAGCAAGAGGAGTGTTGGAAGACCTCCAAAGAAAGCAGCAGAGACCAATGTAGTTAGTACAAAGCGTGGGAGGGAAAGTAGTGCTAGTGCTGGAAAGGATAAACGACCCAAGAAACGTTCTAAGAAATGA 2172 0.4498 MENHQNQNKNPNQDLENQHHQQVWGTWEELLLACAVNRHGFKDWDTVAMEVQSRTNRPTLLATAHHCEQKFHDLNRRFIDDVPPPQQNGDADGVDSDHVPWLDKLRKLRVAELRRDVQRSDVSILSLQLQVKRLEDEKAKENDGKENKKPDLVVSDEEQRPENEKTGREMEETEPANSEPDIRRLDESTTNTDNKLLPTTGEESDRDNQSVNESNSTGSRFDAVKTGEVDIKLNSGPVPVHSGPNEPVQTVRKRKSVEEESNNGSYDNEAKVLTCESVPPSEERKVEGDSSELHDSVTHSGERCARESSEVQSSTSLTKRKNRLRRQKASGGDVMPENEEVARVKSEPLVGLLEMIKGHENFSLFERRLASQHDLNRYKDIVRQHVDLETIQSRLQNGHYSSCTTAFFRDLLLLFTNAAVFFPHDSTESRLAQQLHRLVVAETKSNSQAQSDPITQKTDSHPPNAPLSKPDSLLSKHKASAPILVCRKRSSISVKPSTTTIGQKGDQQPIINDKKEKPSSDVKQSLKPSYSESDEEEPPKAKEKPVTGARSRRSNKNLNSNTGNKKLPSNSTPKTGSSGNKPAEATKSEKNRAEGVSDKKKNAAADFLKRIKRNASVEVLRSGGGGGGSSGSSKGGGSSASMKEQKKTVNNGKGEKGKERASRYNDGGGSGSGDKRNRTIESKRSVGRPPKKAAETNVVSTKRGRESSASAGKDKRPKKRSKK 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01660 723 MobiDBLite consensus disorder prediction 676 690 - -
Car01g01660 723 MobiDBLite consensus disorder prediction 551 584 - -
Car01g01660 723 SUPERFAMILY Homeodomain-like 20 57 IPR009057 -
Car01g01660 723 CDD SANT 24 55 IPR001005 -
Car01g01660 723 MobiDBLite consensus disorder prediction 443 465 - -
Car01g01660 723 Coils Coil 124 144 - -
Car01g01660 723 MobiDBLite consensus disorder prediction 494 723 - -
Car01g01660 723 MobiDBLite consensus disorder prediction 626 647 - -
Car01g01660 723 Pfam Bromodomain 353 433 IPR001487 GO:0005515
Car01g01660 723 MobiDBLite consensus disorder prediction 648 663 - -
Car01g01660 723 CDD Bromodomain 352 442 - -
Car01g01660 723 MobiDBLite consensus disorder prediction 1 20 - -
Car01g01660 723 SMART sant 20 77 IPR001005 -
Car01g01660 723 Pfam Myb-like DNA-binding domain 23 55 IPR001005 -
Car01g01660 723 MobiDBLite consensus disorder prediction 278 306 - -
Car01g01660 723 MobiDBLite consensus disorder prediction 78 98 - -
Car01g01660 723 PANTHER BNAC04G22430D PROTEIN 14 723 - -
Car01g01660 723 MobiDBLite consensus disorder prediction 251 265 - -
Car01g01660 723 MobiDBLite consensus disorder prediction 509 550 - -
Car01g01660 723 MobiDBLite consensus disorder prediction 585 616 - -
Car01g01660 723 Gene3D - 348 461 IPR036427 GO:0005515
Car01g01660 723 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 14 723 - -
Car01g01660 723 SUPERFAMILY Bromodomain 347 444 IPR036427 GO:0005515
Car01g01660 723 MobiDBLite consensus disorder prediction 137 337 - -
Car01g01660 723 MobiDBLite consensus disorder prediction 443 473 - -
Car01g01660 723 ProSiteProfiles Bromodomain profile. 357 429 IPR001487 GO:0005515
Car01g01660 723 SMART bromo_6 120 448 IPR001487 GO:0005515
Car01g01660 723 MobiDBLite consensus disorder prediction 137 190 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car01g01660 Bromodomain 2.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01660 - - gmx:100779988 894.419