Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01652 ATGCAGTTCGGGAAAGCACTTCGAAGAAACGTGCTTATTCTCAGTTACACTTGTTCAACTTTCTCCACCATTTCTCATCACACCACCACCAAACACATTCTACAAACATCTCATTACAGAAAACAAATCTTACTCGCTAATCTCTTCCAATCCTACGGTTTCCCTTCTTCTACCCTTCACAATTTCCTCTCTCACAATCACTTTCTCTTCAATTCCGAAACTTCAGAACTTCGTAAATCTCTTTCCACTCTCTTTTCCTTCCAAATTCCGCAGAAAACCCTTATTTCCCTCGTTCGCGATTGCCCCTCTGTGTTGGAACCCCAATTTCTTCATAATTGGGAATTAGGTTTTCCCGAATTGAAATCCAAGGTTCCTGACACTTCCCCGTTAATGATTGCGAACTTGTTACGATGTTCTAGAAGGTTCCATTTAAACCCTGTTGAAATCTCTCAGAAAGTTGAGGTTTTTAAGGGTTTAGGGTTTTCTGAAAATGTTATGGAAAGGGTTTTGGAAGAATTTCCCAGCGCAATTGTGATGAGGGAAAGTGAAATTGTTGGTGTGATTGATTTTCTTGTGGAATTTGGGATTCTTAGAGAGGAAATTGATAGAGTTGTTAGATTGTATCCTAGGGTTTTGGGATTTGGAGTTGAAGATAGGTTGAAGCCTTTCATTCACGAATTGAGGGGTTTGGGGTTTTCCCGCCGTGAGGTTAGAACAAAGATTGTTAGGGATCCGAGAATTTTAGGAATGGAAATTGGGGAATTTTCGCGGTGTTTGAAGTTGTTACAGAGTTTGAAATGCAGGGAAGCAATTAAAGAGAGGATTTTTGGAGAGGGTTTGGTTAGGGCTTGTTTTGAAGTGAAGTTGAGAGTCGATTGTTTGTGCAGTCACGGTTTGATTCGTAGAGATGCCTTGAAGGTGTTATGGAAGGAACCGAGGTTGATCGCATATGATCTGGAGGATATTGAGAAGAAGATTGAGTTTTTAGTTCATAGGATGAAATATAGTGTTGATTGTTTGCATGAGGTTCCTGAATACTTGGGTGTGAATTTTGAAAAACAGATTGTTCCTAGATACAATGTGATTGAGTATTTGAAAGGAAAAGATGCAATTGGGTTTGAAGTTGGATTGAAGGATCTTGTTAAACCAACTAGGCTTAGATTTTACAATCTTTATGTGAAGCCTTACCCTGAATGTGAAAAAATATATGGGAGATTTTCAGGTAAGGTTGAAGTTAAAAGCAAGCATCCACCTGGACTTTGGAAGCTCTTTAAACCGCAGAAGTTTCCTCAAACTGATCAAGATGTGAAGAACATGAAGGCTTTCATGGACTCACTGGTGTAG 1344 0.3943 MQFGKALRRNVLILSYTCSTFSTISHHTTTKHILQTSHYRKQILLANLFQSYGFPSSTLHNFLSHNHFLFNSETSELRKSLSTLFSFQIPQKTLISLVRDCPSVLEPQFLHNWELGFPELKSKVPDTSPLMIANLLRCSRRFHLNPVEISQKVEVFKGLGFSENVMERVLEEFPSAIVMRESEIVGVIDFLVEFGILREEIDRVVRLYPRVLGFGVEDRLKPFIHELRGLGFSRREVRTKIVRDPRILGMEIGEFSRCLKLLQSLKCREAIKERIFGEGLVRACFEVKLRVDCLCSHGLIRRDALKVLWKEPRLIAYDLEDIEKKIEFLVHRMKYSVDCLHEVPEYLGVNFEKQIVPRYNVIEYLKGKDAIGFEVGLKDLVKPTRLRFYNLYVKPYPECEKIYGRFSGKVEVKSKHPPGLWKLFKPQKFPQTDQDVKNMKAFMDSLV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01652 447 Gene3D Transcription termination factor 3, mitochondrial 181 406 IPR038538 -
Car01g01652 447 SMART mt_12 167 197 IPR003690 GO:0003690|GO:0006355
Car01g01652 447 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Car01g01652 447 SMART mt_12 202 233 IPR003690 GO:0003690|GO:0006355
Car01g01652 447 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Car01g01652 447 SMART mt_12 238 268 IPR003690 GO:0003690|GO:0006355
Car01g01652 447 SMART mt_12 132 162 IPR003690 GO:0003690|GO:0006355
Car01g01652 447 PANTHER CGI-12 PROTEIN-RELATED 57 444 IPR003690 GO:0003690|GO:0006355
Car01g01652 447 Pfam mTERF 53 258 IPR003690 GO:0003690|GO:0006355
Car01g01652 447 Pfam mTERF 290 381 IPR003690 GO:0003690|GO:0006355
Car01g01652 447 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 57 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01652 Car-Chr1 36282237 36283939 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g01652 mTERF 3.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01652 - - cam:101513737 885.56