Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01650 ATGTTGTTAACTACCATTGGATCTGTTCTTTTGTTACTATTCTCTTGCTCCACATTTACTTCAATAGAAGCCTATGATCCGTTAGATCCAAATGGGAATATAACACTCAAATGGGATGTCATTAGTTGGACTCCAGATGGCTATGTTGCTGTTGTGACAATGTACAACTTTCAACAGTATCGCCACATTCAAGAACCAGGATGGACATTAGGTTGGACATGGGCAAAAAAAGAAGTAATTTGGAACATGATGGGAAGCCAAACAACAGAACAAGGAGATTGTTCAAAATTCAAAGCAGGAATTCCACATTGTTGTAAGAAAGATCCAACAGTAGTTGATTTGTTGCCAGGAACACCTTATAACCAACAGATTGCAAACTGTTGTAAAGGTGGTGTGTTGAATTCATGGGCTCAGGATCCAAACAATGCAGTGAGTTCTTTTCAGATAAGTGTTGGTTCTGCTGGAACAACTAATAAAACAGTTAAATTGCCAAGAAATTTCACATTGAAAGCACCTGGACCTGGTTACACTTGTGGTCCTGCAAAAATTGTTAGGCCAACTCAATTTATCACCAATGACAAGAGGAGAGTCACACAAGCTTTGATGACCTGGAACATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGACTCCAACTTGTTGTGTTTCCCTCTCATCCTTCTACAATGACACAATAGTAGACTGCCCAACTTGCACCTGTGGCTGTCAAAACAAAACACAACCTGACAGCTGTGTAAATCCAGACTCTCCACATTTATCTTCAGTTGTATCATCATCAGGCAAACCTACAAATACACCTCTAGTCCAATGTACAAGTCACATGTGTCCGATTCGAGTTCATTGGCATGTGAAACTCAATTATAAAGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAATTACAGGATGAATTACTCACAATGGAACCTTGTGGTGCAGCATCCCAATTTTGATAATCTTACTCAGCTTTTCAGCTTTAAGTACAAGTCACTAACACCCTATGAGGGCTTAAATGATACAGGTATGCTATGGGGAGTAAAATTCTACAATGATTTTCTTTCATCAGCTGCTTCCTATGGTAATGTTCAATCAGAAATCTTATTTAGAAAGGACAAATCAACTTTCACATTTGATAAAGGATGGGCCTTTCCAAGAAGGATTTATTTCAATGGTGATAATTGTGTTATGCCTCCTCCAGATGCTTACCCTTGGTCACCAAATGCAACTTCAAAACTAGTTTTCTCTATACTTAGTACAATCATAGCCACTTTAGCTTCTTTTATAATATTATTATTGAATTGA 1329 0.38 MLLTTIGSVLLLLFSCSTFTSIEAYDPLDPNGNITLKWDVISWTPDGYVAVVTMYNFQQYRHIQEPGWTLGWTWAKKEVIWNMMGSQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPNNAVSSFQISVGSAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVRPTQFITNDKRRVTQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTIVDCPTCTCGCQNKTQPDSCVNPDSPHLSSVVSSSGKPTNTPLVQCTSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFKYKSLTPYEGLNDTGMLWGVKFYNDFLSSAASYGNVQSEILFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWSPNATSKLVFSILSTIIATLASFIILLLN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01650 442 PIRSF COBRA 1 442 IPR006918 GO:0010215|GO:0031225
Car01g01650 442 Pfam COBRA-like protein 48 211 IPR006918 GO:0010215|GO:0031225
Car01g01650 442 PANTHER COBRA-LIKE PROTEIN 8 439 - -
Car01g01650 442 PANTHER PROTEIN COBRA 8 439 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01650 Car-Chr1 36156538 36161014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01650 2 442 COBRA Gene Family AT3G02210 71.946 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01650 - - gmx:100815779 834.713