Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01637 ATGAAGGAGCCAGAGGAGCATCAAGTGAAATCAAGGCCACAACAAAAATTTACACAACATAGAAGGAGGAACAATAGAAGAAGAAGCCAAAACAAGACAGATAAGTTACAAGAAACAGGACATGATTCAAACAAGGTTTCATATCCTACTTGTAAGAGCATTGTGTTTCCTAGTAGGCCTGGTTATGGTCAGCTTGGAACTAAGTGTCTCATCAAAGCCAACCACTTTCTTGTAGATATATCAGTTTCTGACTTAAGCCATTACAATGTTAAAATAATACCTGAAGTAAATTCTAGTAAAACAAGAAAGGCTATTATATCTGAGCTTGTGAGGATTCATAGGAACACTGAATTGGGCATGAGGCTCCCTGTGTTTGATGGAGGAATAAATATTTACACTGCTGGTTTGCTTCCTTTTACATACAAAGAATTCAGTGTAATTTTGAGTGAGGATGATTATGTTACTGGCGGTACCAGGGTAAGAGAATTTAAGGTGACAATCAAGTTTGCAACTAGTGTTAGCATGCAACAACTTAGGGAACTTCTTAATGGAAAACAAGTGGACACACCACAAGAAGCACTTAGTGTCTTTGACATTGTGTTGAAGGAGCTTGCAGCTAAAAGTTACATATCAATTGGGAGGTTTCTCTATTCTCCTGATGTAAGGAAACCGCAGCAACTTGGTGGTGGGATTGAATCATGGCGAGGATTTTACCAGAGTATAAGGCCAACTCAAATGGGATTATCACTTAATATTGGTATGTCATCAATGGCATTTATTGAACCACAACCTGTAATTGACTTTGTTGCTCAAATTCTTGGAAAAGATGTGCACTCAAAACCATTGTCTGATGCAGATCGTGTCAAGATTAAAAAGGCCCTGAGAGGTGTAAAAGTTGAAGTCACACATAGAGGAAATTTTCGAAGGAAGTACAGAATATCAGGGTTGACTTCACAACCAACAAGGGAGCTTATTTTTCCACTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTACTTTCAAGAAATGTATGGATATACAATAAAATATTCTCATCTACCTTGCCTTCAAGTAGGAAGTCAAAGGAAGGTCAACTATTTGCCCATGGAGGCATGCAAGATAGTTAGGGGCCAGAGATATACAAAAGGGCTGAATGAAAAACAGATAACTTCTCTGCTGAAGTTCTCATGCCAGAGACCACGTGAACAAGAAACAGACATTTTGCAGACAATTCAACAAAACAATTATGGGAATGATCCCTATGCAAAAGAGTTTGGTATCAGCATAGACAACAAGCTTGCATCAGTGGAGGCTCGGATTCTGCCTCCTCCATGGTTGAAATATCATGACAGTGGAAGAGAGAAAGAATACTTGCCACAAGTTGGTCAATGGAATATGATGAACAAGAAAGTTATAAATGGAAGTACTGTAAGATATTGGGCATGCATCAATTTCTCACGCAGTGTTCAAGAAAGTACAGCTTGTGGGTTTTGCCAACAGTTAGTTCAGATGTGTCAAATTTCAGGCATGGAATTTAGTAAGGAACCTGTGATTCCTGTATATTCAGCAAGACCAGATCAGGTCAAGAAGGCTTTGAAGTATGTACATACAGCTGCTCTAAACAAACTTGATGGGAAAGAGCTAGAGTTGTTGATTGCCATTCTTCCAGACAATAATGGCTCTTTGTATGGTGATCTCAAAAGAATCTGTGAAACAGATCTTGGATTGATTTCTCAATGCTGCCTTGCAAAATATGTATTCAAGATTAATAGACAGTACCTGGCCAATGTGGCACTAAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTACTTTTGGATGCTCTAAGTTGGAAGATTCCACTAGTTAGTGATATTCCAACAATAATATTTGGAGCTGATGTAACTCACCCAGAATCCGGAGATGATACCTGCCCATCCATTGCTGCTGTAAGAATTTCCAAACTCATACAACTCATAGCCCAATGTTTGATATATACTGATTATTTTAATCCAGGTTGTAGCCTCCCAGGACTGGCCAGAAGTAACGAAGTATGCAGGATTGGTTTGTGCTCAGCCTCACCGCGAAGAGCTCATCCAAGACCTTTTCAAATCTTGGAAAGATCCACAGAGGGGTGTGGTTTATGGCGGTATGATCAGGGAGCTTTTGCTTTCATTTAA 2184 0.3919 MKEPEEHQVKSRPQQKFTQHRRRNNRRRSQNKTDKLQETGHDSNKVSYPTCKSIVFPSRPGYGQLGTKCLIKANHFLVDISVSDLSHYNVKIIPEVNSSKTRKAIISELVRIHRNTELGMRLPVFDGGINIYTAGLLPFTYKEFSVILSEDDYVTGGTRVREFKVTIKFATSVSMQQLRELLNGKQVDTPQEALSVFDIVLKELAAKSYISIGRFLYSPDVRKPQQLGGGIESWRGFYQSIRPTQMGLSLNIGMSSMAFIEPQPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGYTIKYSHLPCLQVGSQRKVNYLPMEACKIVRGQRYTKGLNEKQITSLLKFSCQRPREQETDILQTIQQNNYGNDPYAKEFGISIDNKLASVEARILPPPWLKYHDSGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTACGFCQQLVQMCQISGMEFSKEPVIPVYSARPDQVKKALKYVHTAALNKLDGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLAKYVFKINRQYLANVALKINVKMGGRNTVLLDALSWKIPLVSDIPTIIFGADVTHPESGDDTCPSIAAVRISKLIQLIAQCLIYTDYFNPGCSLPGLARSNEVCRIGLCSASPRRAHPRPFQILERSTEGCGLWRYDQGAFAFI 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01637 727 MobiDBLite consensus disorder prediction 14 29 - -
Car01g01637 727 Pfam Piwi domain 552 656 IPR003165 GO:0003676
Car01g01637 727 ProSiteProfiles PAZ domain profile. 263 377 IPR003100 GO:0005515
Car01g01637 727 ProSiteProfiles Piwi domain profile. 551 652 IPR003165 GO:0003676
Car01g01637 727 Gene3D - 620 663 IPR036397 GO:0003676
Car01g01637 727 Pfam Argonaute linker 2 domain 405 449 IPR032472 -
Car01g01637 727 Pfam Mid domain of argonaute 460 537 IPR032473 -
Car01g01637 727 Gene3D - 441 614 - -
Car01g01637 727 Pfam Argonaute linker 1 domain 211 260 IPR014811 -
Car01g01637 727 PANTHER PROTEIN ARGONAUTE 10 21 655 - -
Car01g01637 727 SUPERFAMILY Ribonuclease H-like 437 659 IPR012337 -
Car01g01637 727 Pfam PAZ domain 267 393 IPR003100 GO:0005515
Car01g01637 727 Gene3D paz domain 257 381 - -
Car01g01637 727 SUPERFAMILY PAZ domain 258 418 IPR036085 GO:0005515
Car01g01637 727 CDD PAZ_argonaute_like 262 376 - -
Car01g01637 727 SMART PAZ_2_a_3 267 399 IPR003100 GO:0005515
Car01g01637 727 Pfam N-terminal domain of argonaute 68 201 IPR032474 -
Car01g01637 727 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 21 655 - -
Car01g01637 727 SMART DUF1785_2 210 262 IPR014811 -
Car01g01637 727 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01637 Car-Chr1 35491097 35498045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01637 56 656 Eukaryotic Initiation Factors Gene Family AT5G43810 69.652 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01637 K11593 - gmx:100813485 1125.54