Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01619 ATGGAAAAAGAAAGAAAATCTTCGGAGCAAGGTTCTTCATCTTCGGCAGCAAATGCAACAAAGCTATTTCAAAGATTGTTTTGTGAGGATGACGAAGTTATAATTCTCCAATGCCTCGCAAGTGACGATCTAAATTCAGATGCAAAGGACGATGCTTACACCAATTTTAAGAACAAACTTAGTTTTAAACCTTGTAAGCGTCAACTTAAAGAGAAGATTCACAATTGGAAGATTAAGTTTGATAACAATGTGAAAAGAAGACTTCCAATTTTTCTTCGTCAACACAGCGTATGA 294 0.3537 MEKERKSSEQGSSSSAANATKLFQRLFCEDDEVIILQCLASDDLNSDAKDDAYTNFKNKLSFKPCKRQLKEKIHNWKIKFDNNVKRRLPIFLRQHSV 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01619 97 Pfam Protein of unknown function, DUF573 23 86 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01619 Car-Chr1 34555797 34556090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01619 2 95 GeBP Transcription Factor Family AT1G11510 34.000 2.24e-10 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Car01g01619 DUF573 9.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01619 - K11998 cam:101498571 83.9593