Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01616 ATGGAAAAAGAAAGAAAATCTTCGGAGCAAAGTTCTTCATCTTCGGCAGCAAATGCAACAAAGCTATTTCAAAGATTGTTTAGTGAGGATGACGAAGTTATAATTCTCCAATGCCTCGCAAGTGACGATCTAAATTCAAATGCAAAGGAAAATGCTTACATCTATTTTAAGAACAAACTTAGTTTTAAACCTAGTAAGCGTCAATTTAAAGAGAATATTCGCAATTGGAAGATTAAGTTTGATAAGAATGTGAAAAGAAGATTTCCAATTTTTCTTCGTCAACACGGCGTATGA 294 0.3333 MEKERKSSEQSSSSSAANATKLFQRLFSEDDEVIILQCLASDDLNSNAKENAYIYFKNKLSFKPSKRQFKENIRNWKIKFDKNVKRRFPIFLRQHGV 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01616 97 Pfam Protein of unknown function, DUF573 23 86 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01616 Car-Chr1 34524002 34524295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01616 9 95 GeBP Transcription Factor Family AT1G11510 32.632 9.03e-10 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Car01g01616 DUF573 3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01616 - K19114 cam:101497918 82.4185