Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01602 ATGAACATTCACCTTGGAGATGAAAAGGAGCAGTGTCAAAAAAAGAGGAAATCTTGTGATGAAACCTCTACCAACATTTACATGAGAACTTCAAGAAAAAGACTATGCAGCAACAAAAATGAAGAAGATAGAaacaacaacgacaacaacaaGGGATCGGTCTCTACAACGTTGAAACTTTACGATGATCCGTGGAAGATAAAGAAGACGCTAACCGACAGCGATCTGGGAATATTGAGCAGACTCTTGTTGGCTGCAGATTTAGTGAAGAAACAGATTTTGCCTATGTTGGATGTTGATGATGCAAGAGCTGCAGAGACTGAGGAAGGTTCTCCAGTTAATGTTTGGGACATGGAAACTAAATCCATGCATCAACTTGTTCTAAAGAGATGGTCTTCATCAAAGAGTTATGTTCTTATTGGGAAATGGAATCAAGATTTTGTGAGAAGGAGAGAGCTTAAGAAAGGAGATGAGATTGGATTCCAATGGGATCCTTTTAACCGAGCTTTTAACTTTTGTGTTCTCAAACGAACTATGTTACCATCATAA 549 0.3734 MNIHLGDEKEQCQKKRKSCDETSTNIYMRTSRKRLCSNKNEEDRNNNDNNKGSVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLDVDDARAAETEEGSPVNVWDMETKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFQWDPFNRAFNFCVLKRTMLPS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01602 182 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 10 177 - -
Car01g01602 182 SUPERFAMILY DNA-binding pseudobarrel domain 63 175 IPR015300 -
Car01g01602 182 MobiDBLite consensus disorder prediction 35 55 - -
Car01g01602 182 CDD B3_DNA 65 176 IPR003340 GO:0003677
Car01g01602 182 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 10 177 - -
Car01g01602 182 Gene3D - 64 178 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01602 Car-Chr1 34163199 34163747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01602 67 162 B3 DNA Binding Superfamily AT1G25560 30.928 4.37e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01602 - - pvu:PHAVU_009G204600g 265.388