Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01599 ATGTCATGTGACACTGTTTTAATTCAAGATGCAATGGGAGAAAAGACTGGGAAGTTTGTGCAGCTAACAAAAACATTCATTGGAGGTTTTGTGATATCATTCACTAAAGGGTGGCTTCTTACTGTCGTAATGACGTCTACTCTTCCACTTATGAAGTTGAACTCTAAACTGAAGGATTCAGAGTCTAGAAACATTGAATTAGAAAACAAATTAAGAAAATGTGAAACTGGAAAAATGGATTCTAAAGTAGCATGCAAGGCAATATTGATGGTTTTCCAAGAGCTTGACTTGTATTCTCCAAAGAACCTAGAAAATGCAGAAAGTGGAAGATTGATTGCTCCACATGAGGCATGTAATAGAATTGCTGAAGTGGTACAAGAGACTATAAGAAAGATGAAATTAGTAGTTGATGAGAAGAAGAGAATGTTCAAGAAGGCTCGCTTAACTATTGAGGCTTGTGATTGCGAATTAGCAGACAAAGGCAGAGAAGCGGGAGAACTCAAGATGGAGAGGCTACAAAAGAAGTCACTGATTGAAGAAACTTGA 546 0.3736 MSCDTVLIQDAMGEKTGKFVQLTKTFIGGFVISFTKGWLLTVVMTSTLPLMKLNSKLKDSESRNIELENKLRKCETGKMDSKVACKAILMVFQELDLYSPKNLENAESGRLIAPHEACNRIAEVVQETIRKMKLVVDEKKRMFKKARLTIEACDCELADKGREAGELKMERLQKKSLIEET 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01599 181 PANTHER PROTEIN OBERON 2 68 180 - -
Car01g01599 181 Gene3D ABC transporter type 1, transmembrane domain 1 136 IPR036640 GO:0005524|GO:0016021
Car01g01599 181 Pfam ABC transporter transmembrane region 1 56 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car01g01599 181 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 68 180 IPR004082 -
Car01g01599 181 Coils Coil 50 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01599 Car-Chr1 34026915 34027460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01599 1 53 Calmodulin-binding Proteins AT2G36910 37.736 4.85e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01599 - - gmx:100795450 160.229