Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01598 ATGGAACAAATTCTTCAGACTGAGAAGGAGAAGGAAAAAGCTATTGATGAGTTGAAAGAAGCACAAAGAGTGGCTGAGGAAGCAAATAAGAAACACAAGGAAGCGTTGGTGGCTCCAAAACTATCTAAAGAGGAATATGAGATTGAAAATAAAGCAGCTCATGTGGTTGATAGTAATAACCAAGTTGGACACTTTCAAAAGTTTCTTACATCTATTCAAATTTTCTGCATTTATTCAATTGCTATTGGAATTCTTATTGAGCTTATAGTGATGTATCCAGTACAAAATAGAAAGTATAGAGATGAAATTGACAATTTTTTGGTGCTTTTGATTGGTGGAATTTCAATTGCATTGCCAATTGGTTTGTCTGTTACAATGGCTATTGGTTCTCATAGGTTTTCACATCAAGGTGCAATCACAAAAGGAATGATAGCTATTGAAGAAATGGCTGGAATGGCTGTTGAAACTATCGGTGATGTTGGAAACCGTTTGGGTTTACTTATCATGACTTTGTTGTTCGGTCAAATGTTTGTTAGTTTTGGTATTAATCAGAGTAACATCACCGATGTTGTTGAACAAGTGTTTAAGGTATCACTGGAATTTGTATGTTTTACCATAGGAAGTGGGGTGGTTGCATTCCTCTAG 645 0.3566 MEQILQTEKEKEKAIDELKEAQRVAEEANKKHKEALVAPKLSKEEYEIENKAAHVVDSNNQVGHFQKFLTSIQIFCIYSIAIGILIELIVMYPVQNRKYRDEIDNFLVLLIGGISIALPIGLSVTMAIGSHRFSHQGAITKGMIAIEEMAGMAVETIGDVGNRLGLLIMTLLFGQMFVSFGINQSNITDVVEQVFKVSLEFVCFTIGSGVVAFL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01598 214 Coils Coil 1 38 - -
Car01g01598 214 PANTHER PLASMA MEMBRANE ATPASE 48 155 - -
Car01g01598 214 Gene3D - 60 152 - -
Car01g01598 214 PANTHER CALCIUM-TRANSPORTING ATPASE 48 155 - -
Car01g01598 214 SUPERFAMILY Calcium ATPase, transmembrane domain M 8 151 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01598 Car-Chr1 34026006 34026785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01598 51 154 Primary Pumps ATPases AT2G18960 78.846 1.57e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01598 K01535 - csv:101213505 159.073