Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g01597 | ATGTTGAAGAATAGACATCAAAGCAATGTTTCAGATAAGACAACAAAGAAAAAGATGTATTTTTGCAAGTATTGTAAGAAGGAGTTCACAAATTGGCACGCTTTAGGGGGACATCAGAATGCTCACAAAAAACAAAGAAAAATTGCAAAAAAAGACAAGATTCTCACCATGACTTCTCCTTATTTTAAAGACTCGTTACCACTTAATTTCAACTCTTATTATAATTCAATTTTTGATCTAAACCAAAACCTTCAGTTACAACTTGGTTTATATAATTACAATTCTCATCAAACAATACTACCTACAAGTGGATCAACCAATGAGATGTTGAATTTGAATTTCATGTCTTTACGTGATTATGAAAAATCTAGTTCATCAACAAGATCTATGAGTAGAGCCAAAGAAGAGCTTGATTTGACTCTCAGACTTGAACTTCCAAGCTAA | 444 | 0.3176 | MLKNRHQSNVSDKTTKKKMYFCKYCKKEFTNWHALGGHQNAHKKQRKIAKKDKILTMTSPYFKDSLPLNFNSYYNSIFDLNQNLQLQLGLYNYNSHQTILPTSGSTNEMLNLNFMSLRDYEKSSSSTRSMSRAKEELDLTLRLELPS | 147 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g01597 | 147 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 20 | 47 | IPR013087 | - | |
Car01g01597 | 147 | PANTHER | OS02G0182300 PROTEIN | 7 | 143 | - | - | |
Car01g01597 | 147 | SUPERFAMILY | beta-beta-alpha zinc fingers | 15 | 47 | IPR036236 | - | |
Car01g01597 | 147 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 22 | 42 | IPR013087 | - | |
Car01g01597 | 147 | Gene3D | Classic Zinc Finger | 2 | 66 | - | - | |
Car01g01597 | 147 | PANTHER | ZINC FINGER PROTEIN JAGGED | 7 | 143 | IPR045320 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car01g01597 | Car-Chr1 | 34021961 | 34022404 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car01g01597 | 9 | 75 | C2H2 Transcription Factor Family | AT5G25160 | 38.571 | 3.04e-12 | 60.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Car01g01597 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g01597 | - | - | gmx:102668090 | 63.1586 |