Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01597 ATGTTGAAGAATAGACATCAAAGCAATGTTTCAGATAAGACAACAAAGAAAAAGATGTATTTTTGCAAGTATTGTAAGAAGGAGTTCACAAATTGGCACGCTTTAGGGGGACATCAGAATGCTCACAAAAAACAAAGAAAAATTGCAAAAAAAGACAAGATTCTCACCATGACTTCTCCTTATTTTAAAGACTCGTTACCACTTAATTTCAACTCTTATTATAATTCAATTTTTGATCTAAACCAAAACCTTCAGTTACAACTTGGTTTATATAATTACAATTCTCATCAAACAATACTACCTACAAGTGGATCAACCAATGAGATGTTGAATTTGAATTTCATGTCTTTACGTGATTATGAAAAATCTAGTTCATCAACAAGATCTATGAGTAGAGCCAAAGAAGAGCTTGATTTGACTCTCAGACTTGAACTTCCAAGCTAA 444 0.3176 MLKNRHQSNVSDKTTKKKMYFCKYCKKEFTNWHALGGHQNAHKKQRKIAKKDKILTMTSPYFKDSLPLNFNSYYNSIFDLNQNLQLQLGLYNYNSHQTILPTSGSTNEMLNLNFMSLRDYEKSSSSTRSMSRAKEELDLTLRLELPS 147
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car01g01597 147 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 47 IPR013087 -
Car01g01597 147 PANTHER OS02G0182300 PROTEIN 7 143 - -
Car01g01597 147 SUPERFAMILY beta-beta-alpha zinc fingers 15 47 IPR036236 -
Car01g01597 147 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Car01g01597 147 Gene3D Classic Zinc Finger 2 66 - -
Car01g01597 147 PANTHER ZINC FINGER PROTEIN JAGGED 7 143 IPR045320 GO:0003700
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Car01g01597 Car-Chr1 34021961 34022404 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01597 9 75 C2H2 Transcription Factor Family AT5G25160 38.571 3.04e-12 60.1
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car01g01597 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01597 - - gmx:102668090 63.1586