Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01586 ATGGTCGGTGATAGGACTAGAAGGAAGAGGAGAATCCATGCATTCTCTTGTGTGAAAGCTTCATTCAAGGGTGAACATTCACTTATAGGAGGGCCAGGTTTCTCAAGGATAGTTTACTGCAACAAACAAGAACATTGTGGTGAAGGGAGTAGTAGTGTTGAGAACTATGGCGACAATTATGTTAGAACTACTAAATATACCATGATCACTTTCATCCCCAAATCATTGTTTGAACAATTTAGAAGGGTTGCCAATTTTTACTTCCTTGTTTGTGCAATCATGTCTTTCTTCCCTGTCTCTCCTTACTCAGCTGTTAGCAAtgttgttcctcttgttgttgtggttgctgttACAATTGGGAAAGAGGCTGTTGAGGATTGGAGGAGGATGAAGCAGGATATTGAGATGAATAACAGAAAGGCTAAAGTTCATAATGGAGAAGGTGTTTTTGAATACTCTAAATGGCGAAACCTGAAAGTTGGAGACATAGTGAAGACCATGAATCTTGATGGAGAAACAAATCTTAAACTGAAACACGCACTGGAAGAAACTTCCAAGTTTCAACAAGATTCTAGCTTTCAAAAGTTCAAGGCTATCATCAAATGTGAAGATCCAAATGCATATCTATATTCTTTCATAGGAAATATTGAACTTGAAAATCAACTATATCCTCTTTCACCTCAGCAGATACTGCTTAGAGACTCAAAGCTAAGGAACACAGACTTTATTTATGGTGTTGCAATTTTTACTGGCCATGATACAAAGGTTATGCAGAATTCCACTGATCCTCCATCAAAAAGAAGCAAAATCGAGAAGCGAATGGACAAGATAATCTTTTTTCTGTTCTTAGTTTTATTTTTTATTTCTTTTATTGGTTCCATTTTATTTGGATTTGAAACAAGAGAGGACCTTGAAAATGGAATAATGAAGAGATGGTACCTCAGACCAGACGATACTACAATCTACTACGATCCAAAGAGAGCGCCGATCGCGGCAATGCTGAATTTCTTGACTGCACTAATGTTGTACAGTTACTTGATTCCAATTTCTTTGTATGTATCCATTGAAATTGTGAAATTTATTCAAAGCATCTTCATCAACCACGACGTGCACATGTATTACGATGAAACTGATCAGCCTGCACACGCTCGTACCTCAAATTTGAACGAAGAACTTGGCCAAGTTGATACTATTCTTTCAGATAAAACAGGAACATTGACTTGCAATTCTATGGACTTTGTCAAGTGTTCGATTGCTGGGATCGCCTACGGGCGAGGTGTTACAGAAGTTGAGAGAGCTCTAGCAAGGAGAAAAGGATTACATTTAAGTCAAGATATGACAGAAGATGGCAATGTTGCAGAGATTTCCGAAGCAAAGTCTTCCATTAAAGGTTTTAACTTCATAGATGAAAGGATTATGAATGGAAATTGGGTCAAGGAACCCAATGCCAATGTAATCCAGAACTTCCTGCGGTTGTTGGCTGTGTGCCATACAGCGATACCTGAAGTTGACGAAGACACAGGCGAAGTTTCATATGAAGCTGAGTCACCTGATGAGGCAGCTTTTGTAATTGCAGCCAGAGAACTTGGATTCGAGTTTTACGAAAGGACTCAGACAACTATTTCGCTGCACGAGTTCCATTATATATCAGGCAGGACAATTAGAAAGTGCTATAAACTTTTAAATATATTAGAGTTTAGTAGTTCAAGAAAACGAATGTCTGTTATTGTAAGAGATGAGGAGGGGAAACTACTACTGCTTAGCAAAGGTGCTGACAGTGTCATGTTTGAAAGACTTGCAAAGAATGGAAGGGAGTTTGAAGAAAAGACTAAGCAACACATTAATGAATATGCTGATGCTGGTTTGAGGACCTTGATACTTGCCTATCGCAAACTCGATGAAGAAGAGTACGACGATTTTAATAAAGAATTGATGGAAGCCAAGAGGTTAGTAAGTGATGATCGGGAGCAGATTGTGGAGGAAGTATCAGAAAAGATCGAGAAGGATTTAGTTCTTCTTGGTGCCACTGCAGTTGAAGACGTACTTCAAAAAGGGGTTCCTGAATGTATTGACAAGCTAGCACAAGCAGGAATTAAGTTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATGTTGGGTTTGCTTGTAGTTTGCTAAGGCAAGGAATGAAGCAAATTAAAATTAGTTCAGACACTGTAGAAACCAAATCTCTTGAGAAAGTGGAAAACAAGTCTGCTGCTGATGAGGCAATTAAGGAAAATGTTGTTTGTAAATTAAGGGAAGGAAAGGAATTACTAGTTACATCTAATGCAAACTCTGAGGCATTAGTTCTGATAATTGATGGGAAATCTCTCACATATGCACTTGAAGATGATATAAAGGACTTGTTTCTTGCACTTGCCGTTGGTTGCACATCGGTTATATGCTGTCGTTCATCTCCGAAGCAAAAAGCACTTGTTACTAGACTAGTAAAACTTAAAACAGGTTGTACTACTCTAGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTACAAGAAGCAGATATTGGGATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCTCAATTCCGATATCTAGAGCGTTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGTTACTTCTTTTACAAGAATATTGCCTTTGGCTTCACTATATTCTTCTATGAGATCTATGCCTCATTCTCAGGACAAGCTGCATACAATGATTGGTTCCTATCACTATATAATGTATTCTTCACTTCACTTCCTGTAATTGCCTTAGGACTATTTGACCAAGATGTCTCTCCTAGATTATGTCTCAAGTTCCCATTATTATACCAAGAAGGTGTACAAAATGTCTTATTTAGCTGGAAAAGGATTCTAGGTTGGGCATTCAATGGAGTAATGAGTTCTACCATAATATTTTTCTTCTGCATCAATGCAATGGAGAATCAAGCATTCCACAAAGGAGGTAAAGTAGTAGGACTTGAAATTCTTGGTGCTACAATGTACACTTGTGTTGTATGGGTAGTGAATTGCCAAATGGCATTATCCATTAGTTACTTCACTTACATACAACATATATTCATTTGGGGTGGAATTCTTTATTGGTATGTATTCCTCCTAACATATGGAACTATTTACCCTTTATCAACCACTGCTTATAAAGTCTTAATTGAAGCTTGTGCACCAGCACCATCTTACTGGCTTAATACTCTCCTTGTTCTTGTTGCTTCACTCATTCCATATTTGGTATATGCTTCAATCCAAATGAGATTCTTTCCTATGTTCCATCAAATGATACATTCGATATACAACGATGGTGAAGCAACTGATCTGGAATACGTTCATGTTGTTCGACAGAGATCAATAAGGCACATGACAGTTGGGTTCACAGCTCGTTTTGAAGCATCCAAGACTTTAGTACTACCATAG 3492 0.3777 MVGDRTRRKRRIHAFSCVKASFKGEHSLIGGPGFSRIVYCNKQEHCGEGSSSVENYGDNYVRTTKYTMITFIPKSLFEQFRRVANFYFLVCAIMSFFPVSPYSAVSNVVPLVVVVAVTIGKEAVEDWRRMKQDIEMNNRKAKVHNGEGVFEYSKWRNLKVGDIVKTMNLDGETNLKLKHALEETSKFQQDSSFQKFKAIIKCEDPNAYLYSFIGNIELENQLYPLSPQQILLRDSKLRNTDFIYGVAIFTGHDTKVMQNSTDPPSKRSKIEKRMDKIIFFLFLVLFFISFIGSILFGFETREDLENGIMKRWYLRPDDTTIYYDPKRAPIAAMLNFLTALMLYSYLIPISLYVSIEIVKFIQSIFINHDVHMYYDETDQPAHARTSNLNEELGQVDTILSDKTGTLTCNSMDFVKCSIAGIAYGRGVTEVERALARRKGLHLSQDMTEDGNVAEISEAKSSIKGFNFIDERIMNGNWVKEPNANVIQNFLRLLAVCHTAIPEVDEDTGEVSYEAESPDEAAFVIAARELGFEFYERTQTTISLHEFHYISGRTIRKCYKLLNILEFSSSRKRMSVIVRDEEGKLLLLSKGADSVMFERLAKNGREFEEKTKQHINEYADAGLRTLILAYRKLDEEEYDDFNKELMEAKRLVSDDREQIVEEVSEKIEKDLVLLGATAVEDVLQKGVPECIDKLAQAGIKLWVLTGDKMETAINVGFACSLLRQGMKQIKISSDTVETKSLEKVENKSAADEAIKENVVCKLREGKELLVTSNANSEALVLIIDGKSLTYALEDDIKDLFLALAVGCTSVICCRSSPKQKALVTRLVKLKTGCTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTIFFYEIYASFSGQAAYNDWFLSLYNVFFTSLPVIALGLFDQDVSPRLCLKFPLLYQEGVQNVLFSWKRILGWAFNGVMSSTIIFFFCINAMENQAFHKGGKVVGLEILGATMYTCVVWVVNCQMALSISYFTYIQHIFIWGGILYWYVFLLTYGTIYPLSTTAYKVLIEACAPAPSYWLNTLLVLVASLIPYLVYASIQMRFFPMFHQMIHSIYNDGEATDLEYVHVVRQRSIRHMTVGFTARFEASKTLVLP 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01586 1163 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 164 1158 - -
Car01g01586 1163 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 165 - -
Car01g01586 1163 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 164 1121 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Car01g01586 1163 SFLD C1.7: P-type atpase like 381 888 - -
Car01g01586 1163 Pfam Phospholipid-translocating P-type ATPase C-terminal 865 1114 IPR032630 -
Car01g01586 1163 Pfam Phospholipid-translocating ATPase N-terminal 38 106 IPR032631 -
Car01g01586 1163 SFLD p-type atpase 381 888 IPR044492 -
Car01g01586 1163 Gene3D - 517 672 IPR023299 GO:0000166
Car01g01586 1163 PRINTS P-type cation-transporting ATPase superfamily signature 399 413 - -
Car01g01586 1163 PRINTS P-type cation-transporting ATPase superfamily signature 837 856 - -
Car01g01586 1163 Gene3D - 673 877 IPR023214 -
Car01g01586 1163 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 164 1158 - -
Car01g01586 1163 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 165 - -
Car01g01586 1163 SUPERFAMILY Calcium ATPase, transduction domain A 141 259 IPR008250 -
Car01g01586 1163 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 801 920 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car01g01586 1163 CDD P-type_ATPase_APLT_Dnf-like 58 997 - -
Car01g01586 1163 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Car01g01586 1163 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1114 IPR023298 -
Car01g01586 1163 SUPERFAMILY HAD-like 394 892 IPR036412 -
Car01g01586 1163 Coils Coil 630 657 - -
Car01g01586 1163 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 675 IPR023299 GO:0000166
Car01g01586 1163 Pfam Cation transport ATPase (P-type) 496 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01586 Car-Chr1 33489965 33502335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01586 11 1157 Primary Pumps ATPases AT3G25610 66.922 0.0 1664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01586 K01530 K14802 gmx:100797039 1917.89