Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01576 ATGCTGAGCAAAATTCTTGCAGAAAAGAGGGAAGAGGCTGTCAAGCAAGTATGCCTTGATCCACCATCAGTTTCAAAGCCATTGAAAGAAAAAACTACAAAGGCTGAGAGACGAGCATTGCAGGAGGCTCAAAGAGCTGCAAAAGCTGCTTCTAAAGCTAATGGAAGTACAGCAGTTGCTGAATCTGTGAAAGCAGCCGGAGCTAAAATTAAAAAGCAGTCTTCGCAAAAGAAAGATGGTCCTCCAGTTACACCATCAGTCACTAATGATAAGAAATCTGGAAATCGTCCTTTGGAGAAAGATAGGAAAAAAGATGCTCCTCCTCAACGAATGCAATTTGATGATGAAAACAGAGTAGAAAAGGCTAAAAGGCGCGCATTAGTAAATCAAACTGAAGCAAGAAACAGAGTTGAATTATTTCGGCATTTGCCTCAATATGAACATGGCCCTCAACTTGCTAATCTTGAGTCAAAGCTTTTCCAACTTGACTCAGTGCATCCTGCTGTGTTTAAGGTTGGATTACGTTATATGGCCGGAGATATATCAGGGGTTAATGCTCGTTGTATTGAAATGCTTAGAGCGCTTCAAGAAGCCATTATAGACTACTCCACTCCGCCTGAAAAAGTATTTTTTAGGGATTTAACTACAAAAATCAGCAGTTATATTTCATTTATTAGTGAATGCAGACCTCTTTCTATTAGCATGGGCAATGCGATTAGGTTTGTGAAGAGTCGTATTGCCAAGTTGCCCTTAAGTCATACTGATGCGGAGGCAAAAGCAGCTCTTTGTTCTGATATTGACCGATTCATTCATGAAAAAATAATTATTGCGGATAAGGTGATTGTTGGACATGCTGCTACCAAAGTTAGGGATGGAGATGTTCTTCTCACATATGGTCTGTCTAGTGTTGTTGAGATGATTCTCTTATATGCCCATGATCTTGGGAAACGATTCCGAGTTGTGGTGATAGACTCACGGCCAAAGCTTGAAAGTCAGGCCTTACTTACAAGGCTTATGGCCAAGGGCTTGAGTTGTACATATACTCATATAAATGCTGTTTCTTATATCATGCACGAGGTCACAAAAGTTTTTCTTGGAGCTTCTGCTGTTCTGTCTAATGGAACTGTACTTTCAAGGGTTGGGACGGCATGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTAATCTGTTGTGAAGCTTTTAAGTTTCATGAAAGGGTGCTACTTGATTCGATATGTTGCAATGAAATAGGTGACCCAGGGGATGTAGCCACGGTTCCTGGAAGAATGGATGTCAATTATCTGGACAATTGGACAACTGAAAAGAATTTGCAGCTTTTGAATTTAATGTATGATGTTACACCTTCAGATTATGTCTCAGTTATTGTTACGGATCATGGAATGATCCCTTCTACAAGTGTGCCTGTGATTGTACGCGAGTATGGACAAGAGCATTACTTGATATAG 1473 0.4046 MLSKILAEKREEAVKQVCLDPPSVSKPLKEKTTKAERRALQEAQRAAKAASKANGSTAVAESVKAAGAKIKKQSSQKKDGPPVTPSVTNDKKSGNRPLEKDRKKDAPPQRMQFDDENRVEKAKRRALVNQTEARNRVELFRHLPQYEHGPQLANLESKLFQLDSVHPAVFKVGLRYMAGDISGVNARCIEMLRALQEAIIDYSTPPEKVFFRDLTTKISSYISFISECRPLSISMGNAIRFVKSRIAKLPLSHTDAEAKAALCSDIDRFIHEKIIIADKVIVGHAATKVRDGDVLLTYGLSSVVEMILLYAHDLGKRFRVVVIDSRPKLESQALLTRLMAKGLSCTYTHINAVSYIMHEVTKVFLGASAVLSNGTVLSRVGTACVAMVAHAFRVPVLICCEAFKFHERVLLDSICCNEIGDPGDVATVPGRMDVNYLDNWTTEKNLQLLNLMYDVTPSDYVSVIVTDHGMIPSTSVPVIVREYGQEHYLI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01576 490 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 7 490 - -
Car01g01576 490 Gene3D - 276 483 IPR042529 -
Car01g01576 490 Pfam Initiation factor 2 subunit family 181 472 IPR000649 GO:0044237
Car01g01576 490 MobiDBLite consensus disorder prediction 1 122 - -
Car01g01576 490 MobiDBLite consensus disorder prediction 93 122 - -
Car01g01576 490 MobiDBLite consensus disorder prediction 1 16 - -
Car01g01576 490 SUPERFAMILY NagB/RpiA/CoA transferase-like 178 483 IPR037171 -
Car01g01576 490 MobiDBLite consensus disorder prediction 27 43 - -
Car01g01576 490 MobiDBLite consensus disorder prediction 77 92 - -
Car01g01576 490 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 7 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01576 Car-Chr1 33034688 33040735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01576 26 490 Eukaryotic Initiation Factors Gene Family AT5G38640 69.639 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01576 K03680 - gmx:100778711 744.577