Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01573 ATGCTCTATTTGGATTCACCGGCTGGCGCTGGATTTTCATACTCCGCCAACAAATCATTCTACAACCTTGTGACCGATGAAACGACAGCAAGAGATAATCTTGTTTTTCTACAACAGTGGTTCACAAAATTTTCACATTACAAAAATAATGAGTTCTTCATCACAGGGGAGAGCTATACAGGTCACTTTGCACCCCAACTTGCAGCACTCATTTTACAAACCAAAACCAACATTAATTTAAAAGGAATAGCCATAGGTAACCCCCTCCTAGAGTTTAACACAGATTACAACTCTAGGGGGCAATTTTTGTGGTCACATGGGTTGATAACATATTCAACCTATGAGTTAGTCACAAAAGTTTGCAACTATTCCCGAATTACAAGGGAATATAGAAGTGGGACAGTTAATTCCAGCTGTGTAGAAGTTATTGATCGATTGAATCGGGAGGTTGGTGACTTCATCGATGATTTCGATGTTAGTCAGGATATGTGCCGACCACTAGGACAACACATATGGACTCTACCTCATGGAGAAAAGAAGAGAGCTTTTTGTCTCGAAGACAAAATATTTAATTACTTGAATAAGAAAGGAGTTCAAAAAGCTCTCCATACTAGGATTTCCTCGTGGCAAACTTGTGGAGCTATCTGGTATGACAGCAAAAGTATTGAAAATTCAACCATATCTCTTCTAGGAACACTTGTTAAATCAGGTGTTAGAGTTATGGTATTTAGTGGAGATCAAGATTCTGTCATACCATTCTTTAGCACCCAATCTTTATTGGATGGATTAGCTAAGGACCTTGGGTTGTACGTAGGGCCTTATAGACCATGGTATAATGGAATAAAGGTCGCAGGATTTACACAGGTGTATGGTGACATTTTAACATTTGCCACCGTTAGAGGAGCAGGTCATTCTTGTGCATATTCGAAACCGGAAGAAACATTTTTGTTATTTAAAACATTTTTAGAAGGATGGTACCTTCCAAAAATTAAATTGTAA 999 0.3834 MLYLDSPAGAGFSYSANKSFYNLVTDETTARDNLVFLQQWFTKFSHYKNNEFFITGESYTGHFAPQLAALILQTKTNINLKGIAIGNPLLEFNTDYNSRGQFLWSHGLITYSTYELVTKVCNYSRITREYRSGTVNSSCVEVIDRLNREVGDFIDDFDVSQDMCRPLGQHIWTLPHGEKKRAFCLEDKIFNYLNKKGVQKALHTRISSWQTCGAIWYDSKSIENSTISLLGTLVKSGVRVMVFSGDQDSVIPFFSTQSLLDGLAKDLGLYVGPYRPWYNGIKVAGFTQVYGDILTFATVRGAGHSCAYSKPEETFLLFKTFLEGWYLPKIKL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01573 332 Pfam Serine carboxypeptidase 1 324 IPR001563 GO:0004185|GO:0006508
Car01g01573 332 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 313 IPR001563 GO:0004185|GO:0006508
Car01g01573 332 Gene3D alpha/beta hydrolase 1 327 IPR029058 -
Car01g01573 332 PANTHER CARBOXYPEPTIDASE 1 313 - -
Car01g01573 332 SUPERFAMILY alpha/beta-Hydrolases 1 327 IPR029058 -
Car01g01573 332 PRINTS Carboxypeptidase C serine protease (S10) family signature 294 307 IPR001563 GO:0004185|GO:0006508
Car01g01573 332 PRINTS Carboxypeptidase C serine protease (S10) family signature 40 65 IPR001563 GO:0004185|GO:0006508
Car01g01573 332 PRINTS Carboxypeptidase C serine protease (S10) family signature 4 14 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01573 Car-Chr1 32932044 32935910 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01573 174 324 Calmodulin-binding Proteins AT2G22960 30.189 2.70e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01573 K16297 - gmx:100805028 389.423