Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01570 ATGTGGCTACATGGAGGGCCGGGTTGTTCTTCAGTCGGACTTGGTGCTTTCCAGGAGCATGGTCCTTTTCAACCAACTGACCAAGGTTTGGCCAAAAACAACTACAGTTGGAACAAAGAGGCGAATATGCTCTATTTGGATTCACCGGCTGGCGCTGGATTTTCATACTCCGCCAACAAATCATTCTACAACCTTGTGACCGATGAAACGACAGGTATGTTTATTTTTCTTGTGCAAATTAGCCTGAGAGTAATTCCTAAAATGTTGAGTAACCCCCTCCTAGAGTTTAACACAGATTACAACTCTAGGGGGCAATTTTTGTGGTCACATGGGTTGATAACATATTCAACCTATGAGTTAGTCACAAAAGTTTGCAACTATTCCCGAATTACAAGGGAATATAGAAGTGGGACAGTTAATTCCAGCTGTGTAGAAGTTATTGATCGATTGAATCGGGAGGTTGGTGACTTCATCGATGATTTCGATGTTAGTCAGGATATGTGCCGACCACTAGGACAACACATATGGACTCTACCTCATGGAGAAAAGAAGAGAGCTTTTTGTCTCGAAGACAAAATATTTAATTACTTGAATAAGAAAGGAGTTCAAAAAGCTCTCCATACTAGGATTTCCTCGTGGCAAACTTGTGGAGCTATCTGGTATGACAGCAAAAGTATTGAAAATTCAACCATATCTCTTCTAGGAACACTTGTTAAATCAGGTGTTAGAGTTATGGTATTTAGTGGAGATCAAGATTCTGTCATACCATTCTTTAGCACCCAATCTTTATTGGATGGATTAGCTAAGGACCTTGGGTTGTACGTAGGGCCTTATAGACCATGGTATAATGGAATAAAGGTTGCAGGATTTACACATGTTTATGGTGGCAGTTTATCATTTGCCACCATAAGAGGAGCTGGTCAGTACGCAGCAGCTTCGCAACCAGAGCAAACACTTGTGTTATTTAAAGCGTTTTTAGAAGAAAGGCCACTTCCAAAAATTCAAATGTAA 1011 0.4055 MWLHGGPGCSSVGLGAFQEHGPFQPTDQGLAKNNYSWNKEANMLYLDSPAGAGFSYSANKSFYNLVTDETTGMFIFLVQISLRVIPKMLSNPLLEFNTDYNSRGQFLWSHGLITYSTYELVTKVCNYSRITREYRSGTVNSSCVEVIDRLNREVGDFIDDFDVSQDMCRPLGQHIWTLPHGEKKRAFCLEDKIFNYLNKKGVQKALHTRISSWQTCGAIWYDSKSIENSTISLLGTLVKSGVRVMVFSGDQDSVIPFFSTQSLLDGLAKDLGLYVGPYRPWYNGIKVAGFTHVYGGSLSFATIRGAGQYAAASQPEQTLVLFKAFLEERPLPKIQM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01570 336 Gene3D - 231 327 - -
Car01g01570 336 PANTHER CARBOXYPEPTIDASE 88 319 - -
Car01g01570 336 PRINTS Carboxypeptidase C serine protease (S10) family signature 33 45 IPR001563 GO:0004185|GO:0006508
Car01g01570 336 PRINTS Carboxypeptidase C serine protease (S10) family signature 298 311 IPR001563 GO:0004185|GO:0006508
Car01g01570 336 PRINTS Carboxypeptidase C serine protease (S10) family signature 46 56 IPR001563 GO:0004185|GO:0006508
Car01g01570 336 Gene3D - 188 219 - -
Car01g01570 336 Gene3D alpha/beta hydrolase 91 173 IPR029058 -
Car01g01570 336 Gene3D alpha/beta hydrolase 1 90 IPR029058 -
Car01g01570 336 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 88 319 IPR001563 GO:0004185|GO:0006508
Car01g01570 336 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 75 IPR001563 GO:0004185|GO:0006508
Car01g01570 336 PANTHER CARBOXYPEPTIDASE 1 75 - -
Car01g01570 336 Pfam Serine carboxypeptidase 88 327 IPR001563 GO:0004185|GO:0006508
Car01g01570 336 Pfam Serine carboxypeptidase 1 71 IPR001563 GO:0004185|GO:0006508
Car01g01570 336 SUPERFAMILY alpha/beta-Hydrolases 1 331 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01570 Car-Chr1 32895981 32898580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01570 196 331 Calmodulin-binding Proteins AT2G22960 27.857 2.45e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01570 K16297 - gmx:100805028 349.747