Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01557 ATGGTTCATCTAACGCGTTGTCGTAATGGTTGTGGTTTCTACGGTTCTGCTGAAAACAAAAACTTTTGTTCAAAGTGTTACAAAGATTGCATCGAAGAAAACACCAACGCATCAGAAATGGAAGCTATTGATTCTATTACTCTCACAGACACTACAACCATCAAGAAGAAAAATAGGTGCAATAGTTGCAACAAAAAAGTTGGAATACTTGGATTCGAGTGTCGCTGTGGAGATTTATTTTGTGGAAGACATAGATACCCAGAAACACACTCATGTAATGTTGATTGGAAAAACATTGGTCGCCAAATTTTGGCCAAACAAAACCCAAAATGTGTTGGTGACAAATTAGATTCAAGGATATAG 363 0.3691 MVHLTRCRNGCGFYGSAENKNFCSKCYKDCIEENTNASEMEAIDSITLTDTTTIKKKNRCNSCNKKVGILGFECRCGDLFCGRHRYPETHSCNVDWKNIGRQILAKQNPKCVGDKLDSRI 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01557 120 Gene3D - 3 48 - -
Car01g01557 120 PANTHER AN1-TYPE ZINC FINGER PROTEIN 6 120 - -
Car01g01557 120 ProSiteProfiles Zinc finger AN1-type profile. 54 100 IPR000058 GO:0008270
Car01g01557 120 SUPERFAMILY AN1-like Zinc finger 50 114 IPR035896 -
Car01g01557 120 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 43 - -
Car01g01557 120 SMART A20_3 4 28 IPR002653 GO:0003677|GO:0008270
Car01g01557 120 ProSiteProfiles Zinc finger A20-type profile. 1 35 IPR002653 GO:0003677|GO:0008270
Car01g01557 120 Pfam AN1-like Zinc finger 60 93 IPR000058 GO:0008270
Car01g01557 120 Pfam A20-like zinc finger 6 28 IPR002653 GO:0003677|GO:0008270
Car01g01557 120 Gene3D - 49 103 IPR035896 -
Car01g01557 120 SMART AN1_Zf_4 60 97 IPR000058 GO:0008270
Car01g01557 120 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 6 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01557 Car-Chr1 32605100 32605537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01557 7 117 C2H2 Transcription Factor Family AT3G52800 33.333 2.99e-25 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01557 - - cam:105851196 180.644