Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01556 ATGGAAGGTCCTGTTCTTGGTTCATCATCTCCTTCTCAAAAACAGAGTATTTCAGAGAGCTCTGTAACTGATTTATGTGCAGCTATTGATTCTATTACTCTCACAGACACTACAACCATCAAGAAGAAAAATAGGTGCAATAGTTGCAACAAAAAAGTTGGAATACTTGGATTCGAGTGTCGCTGTGGAGATTTATTTTGTGGAAGACATAGATACCCAGAAACACACTCATGTAATGTTGATTGGAAAAACATTGGTCGCCAAATTTTGGCCAAACAAAACCCAAAATGTGTTGGTGACAAATTAGATTCAAGGATATAG 321 0.3707 MEGPVLGSSSPSQKQSISESSVTDLCAAIDSITLTDTTTIKKKNRCNSCNKKVGILGFECRCGDLFCGRHRYPETHSCNVDWKNIGRQILAKQNPKCVGDKLDSRI 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01556 106 Pfam AN1-like Zinc finger 46 79 IPR000058 GO:0008270
Car01g01556 106 ProSiteProfiles Zinc finger AN1-type profile. 40 86 IPR000058 GO:0008270
Car01g01556 106 SMART AN1_Zf_4 46 83 IPR000058 GO:0008270
Car01g01556 106 PANTHER AN1-TYPE ZINC FINGER PROTEIN 30 106 - -
Car01g01556 106 Gene3D - 8 100 IPR035896 -
Car01g01556 106 SUPERFAMILY AN1-like Zinc finger 37 100 IPR035896 -
Car01g01556 106 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 30 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01556 Car-Chr1 32571037 32571357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01556 10 103 C2H2 Transcription Factor Family AT3G52800 42.553 3.12e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01556 - - cam:105851196 199.519