Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01545 ATGGAAGACAGAAGAGTGAACATAATCGGTGCCACATCAGTGATTACACTGATCATTATAATAATCATTGCTCGTGTCTTGTTGAAGCTCTCGAATGCTTTCTTCCTTATTTGTGGTGCTGGTGTTGCTGTGATCTTTGCAGTATTTGCTTTTGTATTTGTCAGCTTAAGCAACAAACGAAGAAGTAAAATATTGGAATCACAGTTGAAATCAGAAGGTCAAGAGCTTAGAATAGAGTACAGTTTCTTAAGAAAAGTTGCAGGGGTTCCTACAAAGTTCAGATACAAAGAGCTTGAAGAAGCAACAGATGGGTTTCAATCACTTCTTGGAAGAGGTTCATCAGCTTTAGTTTTCAAAGGAATTCTCAATGATGGAACTTCAGTTGCTGTGAAAAGAATTGATGCAGAAGAAAGAGGTGAAAAAGAGTTCAAATCAGAAGTTGCAGCTATAGCTAATGTTCATCATGTGAATCTTGTGAGACTTTTGGGCTATTGTAATTCTTCTTCAGCTCCTAGGTATCTTGTTTATGATTTTATCTCAAATGGGTCATTGGATTGTTGGATTTTTCCCAAAAGGGAATCTCAAAGACGTCGACACGGCGGATGCTTGTCATGGAACTTAAGGTATAAAGTTGCAATTGATGTTGCCAAAGGACTTGCATATCTTCACCATGATTGTAGATCAAGGATCTTACACCTTGATGTAAAGCCAGAAAATATACTCTTGGATGAGAGTTTTAGAGCACTTGTTTCGGATTTCGGTCTCTCGAAGCTAACTGGTAAAGATGAAAGCCAAGCAGTGTCTACAATAAAAGGAACAAGAGGGTATATGGCTCCTGAATGGCTATTAGAAAAGGGTATTTCAGATAAGACTGATGTATATAGTTATGGAATGGTTTTATTGGAGATTGTTGGAGGAAGAAAAAATGTGTGTTTGGTTGAAGATGAAAAGGACAAGTCAAAAAGGAAATGGCAGTATTTTCCAAAGATTGTAAATGAGAAAGTTAAACAAGGGAAGATAATGGAAATTGTTGACCATAGGTTAATGGAAGAATGTGATGAGAGGGAGGTGATTAAATTGATTTATGTTGCTTTATGGTGTGTGCAAGAGAAGCCAAGGTTAAGGCCTAGTATGGTTAATGTGGTTGATATGCTTGAAGGTCGTATTCGAGTAGAGGAACCACCAGGTACAAGAATGATTCTTGTTGATTTTCTGTGtgttgatgatgacgatgatgataataataatgttactaataacaataaCATGCTAAGGTTGGATACTATGTATAGTGATCAGAGCAACGTGGAATGTAATTCTACCTACTCGTTTGAAACTACTGTTTTGTCTGGAAGATAG 1359 0.362 MEDRRVNIIGATSVITLIIIIIIARVLLKLSNAFFLICGAGVAVIFAVFAFVFVSLSNKRRSKILESQLKSEGQELRIEYSFLRKVAGVPTKFRYKELEEATDGFQSLLGRGSSALVFKGILNDGTSVAVKRIDAEERGEKEFKSEVAAIANVHHVNLVRLLGYCNSSSAPRYLVYDFISNGSLDCWIFPKRESQRRRHGGCLSWNLRYKVAIDVAKGLAYLHHDCRSRILHLDVKPENILLDESFRALVSDFGLSKLTGKDESQAVSTIKGTRGYMAPEWLLEKGISDKTDVYSYGMVLLEIVGGRKNVCLVEDEKDKSKRKWQYFPKIVNEKVKQGKIMEIVDHRLMEECDEREVIKLIYVALWCVQEKPRLRPSMVNVVDMLEGRIRVEEPPGTRMILVDFLCVDDDDDDNNNVTNNNNMLRLDTMYSDQSNVECNSTYSFETTVLSGR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01545 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Car01g01545 452 SMART serkin_6 103 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01545 452 PANTHER RECEPTOR-LIKE KINASE 1 452 - -
Car01g01545 452 SUPERFAMILY Protein kinase-like (PK-like) 85 386 IPR011009 -
Car01g01545 452 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Car01g01545 452 ProSiteProfiles Protein kinase domain profile. 103 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01545 452 Gene3D Transferase(Phosphotransferase) domain 1 179 394 - -
Car01g01545 452 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 452 - -
Car01g01545 452 Gene3D Phosphorylase Kinase; domain 1 65 178 - -
Car01g01545 452 Pfam Protein kinase domain 107 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01545 Car-Chr1 31764516 31766085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01545 1 397 Receptor kinase-like Gene Family AT5G20050 62.344 1.24e-171 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car01g01545 Pkinase 4.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01545 - - gmx:100791152 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01545 01 31764516 31766085 Car01g01545 01 31764516 31766085 ECH
Car07g00792 07 6983673 6985266 Car01g01545 01 31764516 31766085 PCT