Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01544 ATGGGGACCTCTGAAAACGCCGCCAGTGGCGGCCGAGGTGCCGCCGTCCCTAAAGAGGTTGACTATGCGAATTACTTCTGCACTTACTCCTTCCTCTACCACCAAAAAGAGATGCTCTCCGATCGTGTTCGCATGGACGCTTACTTCAATGCCGTTTTTGAAAACAAACATCACTTCAAGGACAAGGTTGTTTTGGATGTGGGAGCTGGAAGTGGCATTCTTGCTATATGGTCAGCTCAGGCAGGTGCGAAGAAGGTGTATGCAGTTGAAGCTACTAAGATGTCTGAACACGCACGTGCACTTGTCAAAGCAAATAATCTTGATCACATTGTCGAAGTCATTGAGGGCTCCATGGAGGATATTAATTTGCCAGAGAAAGTTGATGTCATCATCTCTGAATGGATGGGTTATTTTCTTCTGCGCGAATCTATGTTTGATTCTGTTATATGTGCCCGTGACCGCTGGCTCAAACCAACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCAGGACTGGGATAGTAGAACAAAAAGCTGGTGATTACCAGTCAGCTATGGGTGATTGGCACAACTTTGTCGATGAAACAAAAGCCTTCTATGGTGTTGACATGAGCACTTTGGCGAAGCCTTTTGCTGAGGAGCAGAGGAAATACTATCTACAGACATCATTGTGGAGCAATCTTCATCCACATCAAGTCATAGGAACTGCTGGTATAATAATGGAAATTGACTGTTTGACTGCCACAGTGGCTGACATAGAGAAAGTTAGTTCAAAATTTTCTCTATCAATAACTATGGAAAACACAAAATTATGTGGATTTGGAGGGTGGTTTGATGTACATTTTCGGGGACGAAGTGAGGATCCAGCTGAACATGAAATTGAGTTAACTACTGCTCCTAGTGTAGATTACTGTACACATTGGGGCCAGCAGGTTTTCCTATTAAATCCTCCTACACATGTGAGTCAAGGTGATGAGTTAAGTGTTAATTTTCTGATGAGTCGCTCGAAGGAAAACCATCGTTTGATGGAGGTTGAACTTGGGTGTGAGATTCAAAAGCATTCTGGCAAGCTTATTGCACCTTTCAAAAATAAGTACTACATTGAATGA 1122 0.4349 MGTSENAASGGRGAAVPKEVDYANYFCTYSFLYHQKEMLSDRVRMDAYFNAVFENKHHFKDKVVLDVGAGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKANNLDHIVEVIEGSMEDINLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIVEQKAGDYQSAMGDWHNFVDETKAFYGVDMSTLAKPFAEEQRKYYLQTSLWSNLHPHQVIGTAGIIMEIDCLTATVADIEKVSSKFSLSITMENTKLCGFGGWFDVHFRGRSEDPAEHEIELTTAPSVDYCTHWGQQVFLLNPPTHVSQGDELSVNFLMSRSKENHRLMEVELGCEIQKHSGKLIAPFKNKYYIE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01544 373 CDD AdoMet_MTases 64 163 - -
Car01g01544 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Car01g01544 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 10 360 - -
Car01g01544 373 Gene3D - 166 373 - -
Car01g01544 373 Gene3D Vaccinia Virus protein VP39 19 164 IPR029063 -
Car01g01544 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 10 360 IPR025799 GO:0016274|GO:0018216
Car01g01544 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
Car01g01544 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01544 Car-Chr1 31725241 31729864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01544 24 334 C2H2 Transcription Factor Family AT3G12270 33.333 9.78e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01544 K11434 - gmx:100795134 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01544 01 31725241 31729864 Car01g01544 01 31725241 31729864 ECH