Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01532 ATGTCAACGAGCACCCAAGTGGTGGTTCTGGACAACGGCGGAGGTCTGATCAAGGCAGGATTCGGCGGAGAACGCGACCCATCCGCCATTGTCCCTAACTGCCTCTACCGACCTCAATCCTCCAAAAAATGGCTCCACCCAAATCCCTTAAACACCACGACCGCCGAACAAGACCTAACCTCCGCCGCAGTCCGACGTCCTTTGGATCGTGGTTACCTAATAAACCCTGACCTCCAGCGCGAAATCTGGTCCCACCTCTTCACCTCTATTCTTCGCATAAACCCATCTCAATCCTCACTCCTCGTCACTGAACCCCTCTTTACTCTCCCTTCCATCCAACACTCTCTTGACGAACTTGTCTTCGAAGACTTCAACTTCACCTCTCTCTACGTTGCTCACTCTCCTTCCCTTGTTCACCTCTACGAGACCAGTCGCAGGCCCAATGGGCTTCTCTCTAAAGCCCAGTGTAGTCTTGTTGTCGATTTTGGTTTCTCCTTTACACACGCCTCCCCTGTCTTCCAAAACTTCACCCTCAACTACGCTGCTAAGAGGATTGATTTAGGTGGTAAGGCCCTCACAAATTACCTGAAGGAACTTATTTCCTTTCGTTCCATTAACGTTATGGATGAAACTTTCATCATCGATGATGTTAAGGAGAATATCTGCTTTGTTTCCCTCGATGTTGATCACCATCTTAACATTGCTAGGAAGAGGGGAAAAGATAATGTATTGAGGTGCACATATGTGCTTCCTGATGGTGTCACCTACACAAAGGGGTTTGTTAAATATCCAGAACAAGCAAACATGTATCTTGCCGCTCATGGTAATGCCCACCACGGGGAGCAAATTGCCCAACAACAACCCCAGGAAGAGGAGGAAGAGGAAAAGGGCAATAAGAAGAACATATTTGATTTGACAAAAAATGAATTTGACTTGACAAATGAACGCTTTCTTGTCCCTGAGATGATCTTCCGGCCAGCTGATTTGGGAATGAACCAGGCTGGTCTACCAGAATGTATTGTACGAGCAGTTAATGCATGCCACCCACATCTCCACCCCGTACTCTATGAAAGCATCATTTTAACTGGTGGAAGCACCTTGTTTCCTCACTTTGCCGAGAGACTGTAA 1128 0.4734 MSTSTQVVVLDNGGGLIKAGFGGERDPSAIVPNCLYRPQSSKKWLHPNPLNTTTAEQDLTSAAVRRPLDRGYLINPDLQREIWSHLFTSILRINPSQSSLLVTEPLFTLPSIQHSLDELVFEDFNFTSLYVAHSPSLVHLYETSRRPNGLLSKAQCSLVVDFGFSFTHASPVFQNFTLNYAAKRIDLGGKALTNYLKELISFRSINVMDETFIIDDVKENICFVSLDVDHHLNIARKRGKDNVLRCTYVLPDGVTYTKGFVKYPEQANMYLAAHGNAHHGEQIAQQQPQEEEEEEKGNKKNIFDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLPECIVRAVNACHPHLHPVLYESIILTGGSTLFPHFAERL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01532 375 Gene3D - 8 131 - -
Car01g01532 375 SUPERFAMILY Actin-like ATPase domain 3 138 IPR043129 -
Car01g01532 375 SMART actin_3 5 375 IPR004000 -
Car01g01532 375 CDD NBD_sugar-kinase_HSP70_actin 8 199 - -
Car01g01532 375 SUPERFAMILY Actin-like ATPase domain 155 375 IPR043129 -
Car01g01532 375 Gene3D Actin; Chain A, domain 2 35 67 - -
Car01g01532 375 Pfam Actin 4 375 IPR004000 -
Car01g01532 375 Gene3D - 132 375 - -
Car01g01532 375 MobiDBLite consensus disorder prediction 285 300 - -
Car01g01532 375 PANTHER ACTIN-RELATED PROTEIN 6 8 375 IPR030054 GO:0005634|GO:0006338
Car01g01532 375 MobiDBLite consensus disorder prediction 278 300 - -
Car01g01532 375 Gene3D Actin; Chain A, domain 4 193 335 - -
Car01g01532 375 PANTHER ACTIN 8 375 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01532 Car-Chr1 31079075 31082980 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01532 6 375 Cytoskeleton Gene Families AT3G12110 25.867 1.62e-42 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01532 K11662 - gmx:100819827 582.793