Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01529 atgttgcttgatgaaaataaaggtgGAGAAGAAATTAGAGAATCTGAGTGTCCTCTTTGTCATAAATTATTTTGTGCAAGGTGTCATGTTCCTTGGCATCCTAGTGTTGGTTTTGAGGAGTTTCAGAAACTTAATGTGGATGAGAGAGGGATTCAAGATCTTCTTGTTAGAGAGCTTGTTAATCAGAAAAAGTCGAAAAGGTGTCCCCAATGCAAATTCTATGTTGAAAAAATTGAAGGTTGTTTGCATATCACATGTAGTGATGCAGAATATAAAAATTTGAAGTCAATGAAAGACATTGAAGATGATATGTTATAA 318 0.3145 MLLDENKGGEEIRESECPLCHKLFCARCHVPWHPSVGFEEFQKLNVDERGIQDLLVRELVNQKKSKRCPQCKFYVEKIEGCLHITCSDAEYKNLKSMKDIEDDML 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01529 105 SUPERFAMILY RING/U-box 49 86 - -
Car01g01529 105 ProSiteProfiles TRIAD supradomain profile. 1 105 IPR044066 -
Car01g01529 105 SUPERFAMILY RING/U-box 16 43 - -
Car01g01529 105 Gene3D - 38 92 - -
Car01g01529 105 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 1 87 - -
Car01g01529 105 Pfam IBR domain, a half RING-finger domain 7 35 IPR002867 -
Car01g01529 105 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 1 87 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01529 Car-Chr1 30834961 30836285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01529 7 86 C3H Transcription Factor Family AT2G19610 33.750 7.75e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01529 K11975 - mtr:MTR_1g105450 154.066