Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01518 ATGGCTCCTCCATGGGTTCAAGAACTCCATCTCAATCCCATGACTATTCCAGTAACCATTGTCAACAAATTCTCCGTTACTCCATCGAAGCCTATTCCGGTTAAACTAGGCGATAGCTTATACCTTTCAAACCTCGATGACCTGATTGGAGCGCGCGTGTTCACTCCGACCGTGTACTTTTATCAATCAAACAACTTAAGTTCTTCCCAAAAACCAGTCATTAAAGTACTTGGCCGCGCTCTTGCAGATGTTTTGGTTCCTTATTACCCTCTCTCAGGAAGGTTAAGAGAGACCAAAAGCGGTAAATTGGAAGTATTTTTCGGAGAAGAACAAGGAGCATTAATGGTAGAAGCAAGATCTAACATTGCTTTATCTGAATTAGGAGATTTTGCAGCTCCAAACCCATCTTGGGAACCATTGATTTTTAAATTCCCTAATGAAGAACAATACAAAGTCCTAGAAATGCCACTTGTTATAGCTCAGGTTACATTATTCACATGTGGTGGATTTAGCCTTGGTTTAAGGCTTTGTCATTGTATCTGTGATGGAATGGGAGCTATGCAATTTCTAGGAGCATGGGCAGCAACAGCAAAATCAGGAACATTGGTAACAGAACCTGAACCCTGTTGGAACAGAGAGATTTTCAAGCCTCGTGATCCCCCTGTAGTGAAATTTCCTCACATGGAGTTCATGAGAATTGATGAGGGTTCAAACTTAACAATGAAGCTATGGAAAACAAAGCCGGTTCAAAAGTGTTACAGAATCAAACGTGAGTTTCAAAACCATTTGAAAGCAGTTGGTCAGCCATTTGATGATGCAGGCTGCACTACATTTGATGCAATGGCAGCACATATTTGGAGATCATGGGTTAAAGCTCTTGATGTGAAGCCTCTTGATTACCAATTAAGGTTAACATTTTCAGTTAATGCTAGACAGAAGCTTAAAAATCCACCATTGAAACAAGGGTTTTATGGTAATGTGCTTTGTATTGCTTGTACAACAAGCAGTGTTTCTGAGCTTGTGAATGGGAAATTACCAGAGACTACCCTTTTGGTTCGTGAAGCTAGACAGAATGTAACAGAGGAATATTTGAGATCAACTGTTGATTATGTTGAGGTTGATAGACCAAAACAACTTGAGTTTGGGGGTAAACTTACAATAACTCAATGGACAAGATTTTCAATTTATAAATGTGCTGATTTTGGATGGGGTAAGCCAATTTATGCTGGTCCTATAGATTTAACACCTACGCCTCAAGTTTGTGTTTTTTTACCAGAAGGGGAAGGTGATTCTTGTTGCGGTTCTATGATTGTTTGCATTTGCTTGCCTGAATCTGCTGCTCACAAGTTTACACAAGCCTTGTTGATTGATTCGGTGTTGACCCATACAAGTGGATTTAATTAG 1404 0.3989 MAPPWVQELHLNPMTIPVTIVNKFSVTPSKPIPVKLGDSLYLSNLDDLIGARVFTPTVYFYQSNNLSSSQKPVIKVLGRALADVLVPYYPLSGRLRETKSGKLEVFFGEEQGALMVEARSNIALSELGDFAAPNPSWEPLIFKFPNEEQYKVLEMPLVIAQVTLFTCGGFSLGLRLCHCICDGMGAMQFLGAWAATAKSGTLVTEPEPCWNREIFKPRDPPVVKFPHMEFMRIDEGSNLTMKLWKTKPVQKCYRIKREFQNHLKAVGQPFDDAGCTTFDAMAAHIWRSWVKALDVKPLDYQLRLTFSVNARQKLKNPPLKQGFYGNVLCIACTTSSVSELVNGKLPETTLLVREARQNVTEEYLRSTVDYVEVDRPKQLEFGGKLTITQWTRFSIYKCADFGWGKPIYAGPIDLTPTPQVCVFLPEGEGDSCCGSMIVCICLPESAAHKFTQALLIDSVLTHTSGFN 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01518 467 PANTHER F21B7.2 12 455 - -
Car01g01518 467 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 455 - -
Car01g01518 467 Gene3D - 237 454 IPR023213 -
Car01g01518 467 Pfam Transferase family 17 452 - -
Car01g01518 467 Gene3D - 15 232 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01518 Car-Chr1 29982883 29984367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01518 18 455 Monolignol Biosynthesis Gene Families AT5G48930 30.067 1.34e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01518 K15400 - gmx:100802814 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01518 01 29982883 29984367 Car01g01518 01 29982883 29984367 ECH