Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01514 ATGATGTCTAAGTTAAATAATATGTCAATTCTTTTAGTAATTGGTTTTGCTGCAGCAATACTACAAAGCACAGAAGCAACAGATCATATTGTAGGAGGTTCTACTGGTTGGATTAGTTCACCTCCTGCTTCGTTTTACTCCAACTGGGCCTCTAATATCACATTCAGAGAAAACGATGTCCTAGTTTTCAACTTTGTCGCCGGAGCCCACACGGTTGCTGAACTTAACAAGGCAAACTATGACAGCTGCAACTTGAGTCAACCTATCCAAGTCATAGGAACATCACCAGCAAAAATCACCTTGAACAAAACTGGAGAATTCTATTTTTCATGTTCCTTCCAAGGCCATTGTAGTAGTGGCCAAAAGCTAAGCGTTAAAGTCATTTCCTCTTCACCTGCTCCAGCAAATCCTCCTTCACCAACTAATGGTCCTTCTCCTCCACCATCTGGAACCACACCTTCTCCTCCACCATCTGGAACCACACCTTCTCCTCCACCATCTGGAACCACACCTTCTCCTCCACCATCTGGAACCACACCTTCTCCTCCACCATCTGGAACCACACCTTCTCCACCATCTCCTACCCCACCTACCAACGGTGGTTCACCACCTCCGTCGTCTCCAACTCAGCCTGATGCGACTCCTCCATCAGAGGGCTCAGCCACCACCCTCTTTGCGACTTTCTCTATTCTTATCGCTCTTGTCATAAACTTATTGTTTTAG 723 0.4592 MMSKLNNMSILLVIGFAAAILQSTEATDHIVGGSTGWISSPPASFYSNWASNITFRENDVLVFNFVAGAHTVAELNKANYDSCNLSQPIQVIGTSPAKITLNKTGEFYFSCSFQGHCSSGQKLSVKVISSSPAPANPPSPTNGPSPPPSGTTPSPPPSGTTPSPPPSGTTPSPPPSGTTPSPPPSGTTPSPPSPTPPTNGGSPPPSSPTQPDATPPSEGSATTLFATFSILIALVINLLF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01514 240 PRINTS Proline rich extensin signature 136 148 - -
Car01g01514 240 PRINTS Proline rich extensin signature 150 166 - -
Car01g01514 240 PRINTS Proline rich extensin signature 171 183 - -
Car01g01514 240 PRINTS Proline rich extensin signature 185 206 - -
Car01g01514 240 MobiDBLite consensus disorder prediction 128 220 - -
Car01g01514 240 PANTHER BLUE COPPER PROTEIN 3 230 IPR039391 GO:0009055
Car01g01514 240 Pfam Plastocyanin-like domain 44 121 IPR003245 GO:0009055
Car01g01514 240 SUPERFAMILY Cupredoxins 26 128 IPR008972 -
Car01g01514 240 CDD Stellacyanin 27 127 - -
Car01g01514 240 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Car01g01514 240 Gene3D - 26 137 IPR008972 -
Car01g01514 240 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 3 230 - -
Car01g01514 240 MobiDBLite consensus disorder prediction 133 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01514 Car-Chr1 29633091 29635390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01514 11 189 Phytocyanin Superfamily AT5G53870 32.967 5.77e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01514 - - cam:101507955 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01514 01 29633091 29635390 Car01g01514 01 29633091 29635390 ECH