Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01497 ATGGAAAGTTCCAAGAACAATAAAGTTGAGAAAAGAGGTTATGATGTAGTTAATGAGGATGATGATGGACATCACCATGTTGCTCAATCAAAGAAACCAAAACTACCTGGTTTAGCCAGTGTAATTGTGGAAGCTTTGAAGGTGGATAGTCTGCAAAGACTCTGCTCATCTTTGGAACCGCTTCTCAGAAAAATTGTCAGTGAAGAAGTAGAGCGTGCTTTGGCAAAATTGGACCATGCTAAACTGGCTGAGAGGTCTTCACCACCAAGAATAGAAGCAGCAGGGGAAAAGAATATGCAGCTTCATTTCAGAACAAGAATGCCACCTCACTTGTTCACAGGAGGGAAGGTTGAGGGAGAGCAAGGAGCAGCCATCCATGTTATCTTGTTGGATCCGAATACGGGCAATGTTGTTCAAGTTGGACCAGAATCAGTTGCTAAGTTGAATGTTGTAGTACTTGAAGGTGACTTTAATGAGGAAGCTGATGAAGATTGGACAAAGGACCACTTTGAAAGCCATGAAGTGAAGGAACGCGAGGGGAAAAGGCCACTTCTAACCGGAGATTTGCAAGTTAGTCTAAAGGAAGGAGTAGGAACATTAGGTGATCTTTCTTTCACTGATAATTCTAGCTGGATTAGAAGCAGAAAATTTAGGCTTGGTGTTAAGGTCACTCCTGGTTATTGTGATGGAATTCGAGTGCGCGAGGGTAAGACCGACCCCTTTGCTGTTAAAGATCATAGAGGAGAATTATACAAGAAACACTATCCACCTGCTTTGCATGACGAAGTTTGGAGATTGGATCGGATAGCGAAGGATGGTGCACTTCACAAAAAATTGATTCAATCAAGAATAGTAACTGTAGAAGATTTCCTGCGTCTTCTAGTCCGCGAGCCGCAGAAATTAAGAAGTATACTTGGTAGTGGAATGTCTAACAGAATGTGGGAGAACACTGTGGAACATGCCAAAACATGTGTCTTGGGTAATAAGCTTTTTGTTTACTACACTGATGAAAGCAATAGCACTGGCATTGTGTTCAACAACATATATGAACTGAGAGGCCTCATTGCTGCTAACCAATTCTTCTCTTTAGAATCACTCACTCCAAATCAGAAGATGTCTGTGGATTCCTTGGTGAAAAAAGCATATGATAATTGGGAGCAAGTCATAGAATATGATGGAAAAGTTTTAAATTCTTTGACTAATTCCAAAAGGGAATCAAGATCTGTAACCACTCATACAATGCATCACAACAATTTCCAAGAGCAGCAGTATGCATCTGCAAAGGGCAGGACTTCATACGTCTCATCCGAACTAACAAATCAACATTTGCGAATAACAAATAACTATTCATCATCATCATCTAGTCCTGATTATTCATTTGATAATCAGATGGTAGGAACATCGATAAATGAATTAGAAGGAGCCATGAATTACAACATGTTGTCAGGTAATGATAATCATGAAATTGGAGGGACTAATTATTTTCATGGAGGAGAGTGGTCTAGGCAGAGAAATAATGGACAACAAGGGTTGGAAGACATTGTCGCGGAAGAACTTCGGCTTAGGAGTTCACAAATGTTGGAGAATGATGATATGCAGAGGTTACTTAAGACAATAAATGCAGGAGTTAACATGTCTTCTAATGAGAGTTGTTACTCTTACAGACTTCAGTATGAACCTCAAATGTATCATTCCTTCGGCGAGGATACTGTTAAGTGTTCAGGGAAAGCTGTTGTTGGGTGGCTTAAGCTCAAAGCAGCTTTAAGGTGGGGAATATTTATCAGAAAAAAAGCTGCAGAAAGAAGAGCACAGCTTACTGAGTTGAATTGA 1830 0.4022 MESSKNNKVEKRGYDVVNEDDDGHHHVAQSKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKLDHAKLAERSSPPRIEAAGEKNMQLHFRTRMPPHLFTGGKVEGEQGAAIHVILLDPNTGNVVQVGPESVAKLNVVVLEGDFNEEADEDWTKDHFESHEVKEREGKRPLLTGDLQVSLKEGVGTLGDLSFTDNSSWIRSRKFRLGVKVTPGYCDGIRVREGKTDPFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQSRIVTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGNKLFVYYTDESNSTGIVFNNIYELRGLIAANQFFSLESLTPNQKMSVDSLVKKAYDNWEQVIEYDGKVLNSLTNSKRESRSVTTHTMHHNNFQEQQYASAKGRTSYVSSELTNQHLRITNNYSSSSSSPDYSFDNQMVGTSINELEGAMNYNMLSGNDNHEIGGTNYFHGGEWSRQRNNGQQGLEDIVAEELRLRSSQMLENDDMQRLLKTINAGVNMSSNESCYSYRLQYEPQMYHSFGEDTVKCSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01497 609 MobiDBLite consensus disorder prediction 1 32 - -
Car01g01497 609 Pfam Calmodulin binding protein C-terminal domain 329 391 IPR046829 -
Car01g01497 609 PANTHER OS02G0562300 PROTEIN 8 465 - -
Car01g01497 609 PANTHER OS02G0562300 PROTEIN 433 608 - -
Car01g01497 609 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
Car01g01497 609 PANTHER OS02G0177800 PROTEIN 8 465 IPR012416 GO:0005516
Car01g01497 609 PANTHER OS02G0177800 PROTEIN 433 608 IPR012416 GO:0005516
Car01g01497 609 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
Car01g01497 609 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01497 Car-Chr1 26956219 26959234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01497 1 609 Calmodulin-binding Proteins AT2G24300 61.022 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01497 - - gmx:100775528 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01497 01 26956219 26959234 Car01g01497 01 26956219 26959234 ECH