Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01490 GAAATGCTTGTATCTTGTTGATGGAAAGCCTATGATGACGACCTTTATCATGATCGGAAAATCTCGAAGTGTTGGAAGTGAAGCTGAGTTATGGTCTATGTTGGAGTTTATGATGCCTGATATTTTTGCTTCTGAAGATGTCGATTTAAAAAAGTTACTTAGTGCAGAAGATAGAGATTTAATTAGTCGTATGAAGTCTATCTTAGGGCCATTTATTTTGCGGCGTCTGAAATCTGATGTGATACAGTTCACTATGCTGCTGCAGGTTGAATATGTCATAATGGAAAAGCAACAGGATCATGCTTACAAGGAAGCCATTGAGGAGTAA 328 0.378 KCLYLVDGKPMMTTFIMIGKSRSVGSEAELWSMLEFMMPDIFASEDVDLKKLLSAEDRDLISRMKSILGPFILRRLKSDVIQFTMLLQVEYVIMEKQQDHAYKEAIEE 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01490 108 Gene3D - 25 98 IPR038718 -
Car01g01490 108 Pfam SNF2-related domain 26 105 IPR000330 GO:0005524|GO:0140658
Car01g01490 108 PANTHER SNF2/RAD54 HELICASE FAMILY 29 108 - -
Car01g01490 108 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A CONTAINING DEAD/H BOX 1 29 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01490 Car-Chr1 26559299 26560093 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Car01g01490 SNF2_N 4.5e-08 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01490 K14439 - pvy:116141892 130.568