Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01486 ATGTTACTAATATTAGCTATTAGAAGTTCACCCAACTTTAAAGCCAATAGTTATGTGGCTACATGGAGGGAATATGGAGTCAATCACTGGAGGCTGAGTTGTTCTTCTGTTGGACTTGGAGCTTTCAGGGAGCATGGTCCCTTTAAACCAACCGACAATGGTTTGGTTAAGAATGCCTACAGTTGGAACAAAGAGGCAAACATGCTCTATTTGAAATCAACAGCTGGCGTTGGCTTTTCATACTCCACCAATAAATCCTTCTATAACTATGTGACCAATGACATGACATGTCACTTTGCACATCAACTTGCAGAACTCATTATACATACCAAAACCAATATAAATTTAAAGGGAATAGCCATAGGAAACCCCCTTCTAGAGTTTAACACAGATTACAACTCTAGATGGCAATTTTTGTGGTCTCATGGGTTGAAATCATATTCAACCTATGAGTTACTCACAAAAGTTTGCAACTGTTCCCAAATTAAGAGAGGATATCGAAGGGGAACACCTAGTTCCACCTGTGTAGAAGTTAACAAGAGATTGAATATGGAGCAAGAAGAAAACAAGAGAGCTTTTTGTCTTGAAGACAAAATATTTGCGTACTTGAATAAAAAAGAAGTACAAAAAGCTCTTCATACTAGGTACGCCTCATGGCAATCTTGTAGTGGAGTTATCCGGTATAACAGCAAAAGTTTTGATAATCCAACCATATCTCTATTAGGGACACTTGTTAAATCAGGTGTCAGAATGATGATATTTAGGCTAGTAAATCAAGATTTTGTCATACCATTCATTGGCACACAATCCTTATTGGATGAATTAGCCAAGGAATTCAGGTTCAACGTATCAGAGCCCTTTAAACCATGGTATAATGGAATAAAGGTTGCAGGATTTACACATGTTTATGGTGGCAGTTTATCATTTGCCACCATAAGAGGAGCTGGTCAGTACGCAGCAGCTTCGCAACCAGAGCAAACACTTGTGTTATTTAAAGCGTTTTTAGAAGAAAGGCCACTTCCAAAAATTCAAATGTAA 1038 0.3796 MLLILAIRSSPNFKANSYVATWREYGVNHWRLSCSSVGLGAFREHGPFKPTDNGLVKNAYSWNKEANMLYLKSTAGVGFSYSTNKSFYNYVTNDMTCHFAHQLAELIIHTKTNINLKGIAIGNPLLEFNTDYNSRWQFLWSHGLKSYSTYELLTKVCNCSQIKRGYRRGTPSSTCVEVNKRLNMEQEENKRAFCLEDKIFAYLNKKEVQKALHTRYASWQSCSGVIRYNSKSFDNPTISLLGTLVKSGVRMMIFRLVNQDFVIPFIGTQSLLDELAKEFRFNVSEPFKPWYNGIKVAGFTHVYGGSLSFATIRGAGQYAAASQPEQTLVLFKAFLEERPLPKIQM 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01486 345 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 97 187 IPR001563 GO:0004185|GO:0006508
Car01g01486 345 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 189 341 IPR001563 GO:0004185|GO:0006508
Car01g01486 345 PANTHER CARBOXYPEPTIDASE 97 187 - -
Car01g01486 345 Pfam Serine carboxypeptidase 106 336 IPR001563 GO:0004185|GO:0006508
Car01g01486 345 Pfam Serine carboxypeptidase 34 100 IPR001563 GO:0004185|GO:0006508
Car01g01486 345 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 97 IPR001563 GO:0004185|GO:0006508
Car01g01486 345 PRINTS Carboxypeptidase C serine protease (S10) family signature 71 81 IPR001563 GO:0004185|GO:0006508
Car01g01486 345 PRINTS Carboxypeptidase C serine protease (S10) family signature 307 320 IPR001563 GO:0004185|GO:0006508
Car01g01486 345 PRINTS Carboxypeptidase C serine protease (S10) family signature 58 70 IPR001563 GO:0004185|GO:0006508
Car01g01486 345 PANTHER CARBOXYPEPTIDASE 189 341 - -
Car01g01486 345 PANTHER CARBOXYPEPTIDASE 33 97 - -
Car01g01486 345 Gene3D alpha/beta hydrolase 98 342 IPR029058 -
Car01g01486 345 SUPERFAMILY alpha/beta-Hydrolases 34 340 IPR029058 -
Car01g01486 345 Gene3D alpha/beta hydrolase 32 97 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01486 Car-Chr1 26017466 26021336 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01486 202 340 Calmodulin-binding Proteins AT2G22960 23.239 1.10e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01486 K16297 - gmx:100805028 342.813