Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g01480 | ATGCTAAACATAGTTTATCCTGACACTATAGTTTATGTCAGGGGCAGTTTTAATTGTCCATCTTCCTTTTGTTCTCTCCAAGTTCCAATGGAGATTTTCAAACTCTTCTACTTCATTAATCTTCTCTCAACTATAATGTTAACATCATCTTTAGCAATTGATCGTTACTCACAAGCACTCCTAAGTCTAAAGTCTGAGCTAATAGATGATGATAATAGCTTGCATGATTGGATGGTTCCCTCTATAGGGAACTTAACTACAAGTTCATATGCATGTTCTTGGTCAGGTATCAAATGTAACAAGGACTCAATTGTAACTTCCATAGACCTTTCGATGAAGAAACTCGGAGGTGTACTATCAGGTAACCAATTCAGTTTCTTCACAAATGTTATTCATCTCAACCTGAGCCAAAACTTATTCTCTGGTCAACTTCCAACACAAATTTTCAACCTCACAAGCTTGAAAACCTTGGATATAAGCAGAAACAATTTTTCAGGTCAATTCCCAAAAGGAGTTCACAGCTTAAAAAATCTGGTTGTGCTTGATGCCTTAAGCAACAGCTTTTCAGGAACATTACCTGCTGAATTTTCAGAGTTGAAATATCTTAAAGTTCTTAATCTAGCTGGAAGTTACTTCAGAGGATCAATTCCTTTTGAATTTGGTTCTTTCAGAAGCCTTGAGTTTCTTCATCTAGCTGGAAATTCTCTCACAGGAAATATACCACCAGAACTTGGTAACCTCAAAACAGTGACACACATGGAAATTGGTTACAATTTTTACCATGGTTTTATTCCACCACAACTAGGTAATATGAGCCAGCTTCAGTATCTTGACATAGCAAGTGCAAATCTCTCTGGTCCTATTCCAAAGGAACTTTCTAATCTTACAAATTTGCATTCAATTTTTCTGTTCAGAAACCAGCTAACAGGTTCAATACCAAGTGAATTCAACAAAATTCAACCTCTTACAGACTTAGACCTCTCTGATAACTTCCTTTCAGGATCCATTCCTGAAAGCATTTCAGAGCTGAAGAACTTGAGACTACTTAGTCTCATGTACAATGATATGAGTGGCACTGTTTCTGATGGCATTGCACAACTTCCATCCCTGGAAACTCTACTCATTTGGAACAACAGCTTCAGCGGATCACTCCCGGAGAGCTTAGGAAAAAACTCAAAACTCGGGTGGGTTGATGTCTCCACAAACAACTTCAATGGAAGCATACCACCAAACATTTGTGGCGGTGGAGTACTGTTTAAGCTTATACTGTTTTCAAACAAATTCACAGGTAGTCTTTTCTCAATCTCCAATTGTTCTTCACTTGTTCGACTTCGCCTCGAAGATAATTCATTCTCAGGAGAGATCCCTTTAAAGTTCAAACATTTTCCTGAAATCACATATGTTGATCTGTCATTGAACAATTTTGTTGGTGGAATTCCCTCAGATATTTATAAAGCTACTCATTTGGAGTATTTCAATGTATCTTATAATATGCAATTAGGAGGCAACATCCCTTCACAAATGTGGTCTTTGCCTAAACTTCAAAACTTTTCAGCATCTTCTTGTGGTATTTTAGGCACTATTCCCTTATTTGAGTACTGCAAATCAATTTCAGCAATTGATCTTGGTAAAAACAACTTATCTGGAATAATCCCAAGAAGTGTTTACAAATGTCAAGCCCTTGTGGCAATCAAATTATCTTACAATAATTTGACAGGTAGAATACCTGAAGAGCTTGCAAGTATCCCTATTCTTGAAACTGTAGAGTTATCTAACAATAAAATCAATGGCCTCATACCTGAAAAATTTGGTAGTTCATCAAGTTTACAACTTCTCAATGTGTCTTTCAATAATATCTCAGGTTCAATACCAAAATCAAAGTCATTCATATCAATGGGTAGAAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAGCACCTCTGAGACCATGTACTGAGTCAGTAGGAATATTAGGAGGCAAAAGCACTTGGAAGCTTACATATATTATGTTACTCTCTGTAGGGTTGTTAATAATCCTTCTAGCATTGGCTTTTGGAATACATTATTTCAAAAAGGGATTTAAAAGTCAATGGAAAATGGTTTCATTTGTTGGACTCAATCAATTTACAGCAAATGATGTATTGACAAGCTTCAGTACTTCCACTGAACATACACAAGTTCCATCACCTGTTGTTACAAAAGCATTTCTTCCTACAGGTATAACAGTTTTAGTCAAGAAGATTGAATGGGAAACAAGGAGCATTAAGTTGGTGTCAGAATTTATAATGAGACTAGGAAATGCAAGACACAAGAATTTAATCAGAGTTTTGGGGTTTTGCCATAACCAGAACCTTGTTTACCTTTTGTATGATTACTTGCAAAATGGGAATTTGGCTGAGAAAATTGGAATGAAATGGGATTGGGAAGCTAAACTCAGAACAGTGGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGATTGTTACCCAGCTATACCACATGGAGACTTGAAGTCCAGCAACATTGTATTTGATGAAAATATGGAACCCTATTTGGCTAATTTTGGGTTTAAACATGTGTTACAGTTGAGCAAAGGTTTGTCATCAACCACAACTACGCATGAAACAGAATACAATGAAGAATTGAAAGAGGAACTCTGCAATGATATCTACAATTTTGGAAAGATGATTCTGGAAATCTTAACTGGCGGAAGGTTCACAAGTGTAGCAGCCAGCATTCAAAGCAAATCACACGAGGTTCTTCTAAGAGAAGTTTGCAATGGTAATGAAGTGAGTTCTACCAGTTCTATACAAGACATTAAACTGGTTCTTGAGGTTGCTATGCTTTGTACTAGAAGCAGATCATCTGATCGCCCATCCATGGATGATGCTCTGAAGCTTTTGTCAAGGTTAAAGGATCTGGAAGATCACAAAAACTCTAAATAA | 2949 | 0.3683 | MLNIVYPDTIVYVRGSFNCPSSFCSLQVPMEIFKLFYFINLLSTIMLTSSLAIDRYSQALLSLKSELIDDDNSLHDWMVPSIGNLTTSSYACSWSGIKCNKDSIVTSIDLSMKKLGGVLSGNQFSFFTNVIHLNLSQNLFSGQLPTQIFNLTSLKTLDISRNNFSGQFPKGVHSLKNLVVLDALSNSFSGTLPAEFSELKYLKVLNLAGSYFRGSIPFEFGSFRSLEFLHLAGNSLTGNIPPELGNLKTVTHMEIGYNFYHGFIPPQLGNMSQLQYLDIASANLSGPIPKELSNLTNLHSIFLFRNQLTGSIPSEFNKIQPLTDLDLSDNFLSGSIPESISELKNLRLLSLMYNDMSGTVSDGIAQLPSLETLLIWNNSFSGSLPESLGKNSKLGWVDVSTNNFNGSIPPNICGGGVLFKLILFSNKFTGSLFSISNCSSLVRLRLEDNSFSGEIPLKFKHFPEITYVDLSLNNFVGGIPSDIYKATHLEYFNVSYNMQLGGNIPSQMWSLPKLQNFSASSCGILGTIPLFEYCKSISAIDLGKNNLSGIIPRSVYKCQALVAIKLSYNNLTGRIPEELASIPILETVELSNNKINGLIPEKFGSSSSLQLLNVSFNNISGSIPKSKSFISMGRSAFVGNSELCGAPLRPCTESVGILGGKSTWKLTYIMLLSVGLLIILLALAFGIHYFKKGFKSQWKMVSFVGLNQFTANDVLTSFSTSTEHTQVPSPVVTKAFLPTGITVLVKKIEWETRSIKLVSEFIMRLGNARHKNLIRVLGFCHNQNLVYLLYDYLQNGNLAEKIGMKWDWEAKLRTVVGIARGLCFLHHDCYPAIPHGDLKSSNIVFDENMEPYLANFGFKHVLQLSKGLSSTTTTHETEYNEELKEELCNDIYNFGKMILEILTGGRFTSVAASIQSKSHEVLLREVCNGNEVSSTSSIQDIKLVLEVAMLCTRSRSSDRPSMDDALKLLSRLKDLEDHKNSK | 982 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g01480 | 982 | SUPERFAMILY | Protein kinase-like (PK-like) | 731 | 969 | IPR011009 | - | |
Car01g01480 | 982 | Pfam | Leucine rich repeat N-terminal domain | 58 | 100 | IPR013210 | - | |
Car01g01480 | 982 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE | 37 | 974 | - | - | |
Car01g01480 | 982 | SUPERFAMILY | L domain-like | 336 | 651 | - | - | |
Car01g01480 | 982 | PANTHER | UNNAMED PRODUCT | 37 | 974 | - | - | |
Car01g01480 | 982 | SMART | serkin_6 | 709 | 973 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car01g01480 | 982 | Pfam | Protein kinase domain | 738 | 967 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car01g01480 | 982 | Gene3D | Ribonuclease Inhibitor | 419 | 655 | IPR032675 | - | |
Car01g01480 | 982 | Gene3D | Ribonuclease Inhibitor | 249 | 418 | IPR032675 | - | |
Car01g01480 | 982 | Gene3D | Transferase(Phosphotransferase) domain 1 | 791 | 982 | - | - | |
Car01g01480 | 982 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 833 | 845 | IPR008271 | GO:0004672|GO:0006468 | |
Car01g01480 | 982 | Gene3D | Phosphorylase Kinase; domain 1 | 692 | 790 | - | - | |
Car01g01480 | 982 | ProSiteProfiles | Protein kinase domain profile. | 698 | 972 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car01g01480 | 982 | SUPERFAMILY | RNI-like | 107 | 429 | - | - | |
Car01g01480 | 982 | Gene3D | Ribonuclease Inhibitor | 55 | 174 | IPR032675 | - | |
Car01g01480 | 982 | Gene3D | Ribonuclease Inhibitor | 175 | 248 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car01g01480 | Car-Chr1 | 25813219 | 25816698 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car01g01480 | 45 | 974 | Receptor kinase-like Gene Family | AT5G51350 | 52.119 | 0.0 | 913 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Car01g01480 | Pkinase | 2.1e-16 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g01480 | - | - | aprc:113852384 | 1438.71 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car01g01480 | 01 | 25813219 | 25816698 | Car01g01480 | 01 | 25813219 | 25816698 | ECH |