Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01480 ATGCTAAACATAGTTTATCCTGACACTATAGTTTATGTCAGGGGCAGTTTTAATTGTCCATCTTCCTTTTGTTCTCTCCAAGTTCCAATGGAGATTTTCAAACTCTTCTACTTCATTAATCTTCTCTCAACTATAATGTTAACATCATCTTTAGCAATTGATCGTTACTCACAAGCACTCCTAAGTCTAAAGTCTGAGCTAATAGATGATGATAATAGCTTGCATGATTGGATGGTTCCCTCTATAGGGAACTTAACTACAAGTTCATATGCATGTTCTTGGTCAGGTATCAAATGTAACAAGGACTCAATTGTAACTTCCATAGACCTTTCGATGAAGAAACTCGGAGGTGTACTATCAGGTAACCAATTCAGTTTCTTCACAAATGTTATTCATCTCAACCTGAGCCAAAACTTATTCTCTGGTCAACTTCCAACACAAATTTTCAACCTCACAAGCTTGAAAACCTTGGATATAAGCAGAAACAATTTTTCAGGTCAATTCCCAAAAGGAGTTCACAGCTTAAAAAATCTGGTTGTGCTTGATGCCTTAAGCAACAGCTTTTCAGGAACATTACCTGCTGAATTTTCAGAGTTGAAATATCTTAAAGTTCTTAATCTAGCTGGAAGTTACTTCAGAGGATCAATTCCTTTTGAATTTGGTTCTTTCAGAAGCCTTGAGTTTCTTCATCTAGCTGGAAATTCTCTCACAGGAAATATACCACCAGAACTTGGTAACCTCAAAACAGTGACACACATGGAAATTGGTTACAATTTTTACCATGGTTTTATTCCACCACAACTAGGTAATATGAGCCAGCTTCAGTATCTTGACATAGCAAGTGCAAATCTCTCTGGTCCTATTCCAAAGGAACTTTCTAATCTTACAAATTTGCATTCAATTTTTCTGTTCAGAAACCAGCTAACAGGTTCAATACCAAGTGAATTCAACAAAATTCAACCTCTTACAGACTTAGACCTCTCTGATAACTTCCTTTCAGGATCCATTCCTGAAAGCATTTCAGAGCTGAAGAACTTGAGACTACTTAGTCTCATGTACAATGATATGAGTGGCACTGTTTCTGATGGCATTGCACAACTTCCATCCCTGGAAACTCTACTCATTTGGAACAACAGCTTCAGCGGATCACTCCCGGAGAGCTTAGGAAAAAACTCAAAACTCGGGTGGGTTGATGTCTCCACAAACAACTTCAATGGAAGCATACCACCAAACATTTGTGGCGGTGGAGTACTGTTTAAGCTTATACTGTTTTCAAACAAATTCACAGGTAGTCTTTTCTCAATCTCCAATTGTTCTTCACTTGTTCGACTTCGCCTCGAAGATAATTCATTCTCAGGAGAGATCCCTTTAAAGTTCAAACATTTTCCTGAAATCACATATGTTGATCTGTCATTGAACAATTTTGTTGGTGGAATTCCCTCAGATATTTATAAAGCTACTCATTTGGAGTATTTCAATGTATCTTATAATATGCAATTAGGAGGCAACATCCCTTCACAAATGTGGTCTTTGCCTAAACTTCAAAACTTTTCAGCATCTTCTTGTGGTATTTTAGGCACTATTCCCTTATTTGAGTACTGCAAATCAATTTCAGCAATTGATCTTGGTAAAAACAACTTATCTGGAATAATCCCAAGAAGTGTTTACAAATGTCAAGCCCTTGTGGCAATCAAATTATCTTACAATAATTTGACAGGTAGAATACCTGAAGAGCTTGCAAGTATCCCTATTCTTGAAACTGTAGAGTTATCTAACAATAAAATCAATGGCCTCATACCTGAAAAATTTGGTAGTTCATCAAGTTTACAACTTCTCAATGTGTCTTTCAATAATATCTCAGGTTCAATACCAAAATCAAAGTCATTCATATCAATGGGTAGAAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAGCACCTCTGAGACCATGTACTGAGTCAGTAGGAATATTAGGAGGCAAAAGCACTTGGAAGCTTACATATATTATGTTACTCTCTGTAGGGTTGTTAATAATCCTTCTAGCATTGGCTTTTGGAATACATTATTTCAAAAAGGGATTTAAAAGTCAATGGAAAATGGTTTCATTTGTTGGACTCAATCAATTTACAGCAAATGATGTATTGACAAGCTTCAGTACTTCCACTGAACATACACAAGTTCCATCACCTGTTGTTACAAAAGCATTTCTTCCTACAGGTATAACAGTTTTAGTCAAGAAGATTGAATGGGAAACAAGGAGCATTAAGTTGGTGTCAGAATTTATAATGAGACTAGGAAATGCAAGACACAAGAATTTAATCAGAGTTTTGGGGTTTTGCCATAACCAGAACCTTGTTTACCTTTTGTATGATTACTTGCAAAATGGGAATTTGGCTGAGAAAATTGGAATGAAATGGGATTGGGAAGCTAAACTCAGAACAGTGGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGATTGTTACCCAGCTATACCACATGGAGACTTGAAGTCCAGCAACATTGTATTTGATGAAAATATGGAACCCTATTTGGCTAATTTTGGGTTTAAACATGTGTTACAGTTGAGCAAAGGTTTGTCATCAACCACAACTACGCATGAAACAGAATACAATGAAGAATTGAAAGAGGAACTCTGCAATGATATCTACAATTTTGGAAAGATGATTCTGGAAATCTTAACTGGCGGAAGGTTCACAAGTGTAGCAGCCAGCATTCAAAGCAAATCACACGAGGTTCTTCTAAGAGAAGTTTGCAATGGTAATGAAGTGAGTTCTACCAGTTCTATACAAGACATTAAACTGGTTCTTGAGGTTGCTATGCTTTGTACTAGAAGCAGATCATCTGATCGCCCATCCATGGATGATGCTCTGAAGCTTTTGTCAAGGTTAAAGGATCTGGAAGATCACAAAAACTCTAAATAA 2949 0.3683 MLNIVYPDTIVYVRGSFNCPSSFCSLQVPMEIFKLFYFINLLSTIMLTSSLAIDRYSQALLSLKSELIDDDNSLHDWMVPSIGNLTTSSYACSWSGIKCNKDSIVTSIDLSMKKLGGVLSGNQFSFFTNVIHLNLSQNLFSGQLPTQIFNLTSLKTLDISRNNFSGQFPKGVHSLKNLVVLDALSNSFSGTLPAEFSELKYLKVLNLAGSYFRGSIPFEFGSFRSLEFLHLAGNSLTGNIPPELGNLKTVTHMEIGYNFYHGFIPPQLGNMSQLQYLDIASANLSGPIPKELSNLTNLHSIFLFRNQLTGSIPSEFNKIQPLTDLDLSDNFLSGSIPESISELKNLRLLSLMYNDMSGTVSDGIAQLPSLETLLIWNNSFSGSLPESLGKNSKLGWVDVSTNNFNGSIPPNICGGGVLFKLILFSNKFTGSLFSISNCSSLVRLRLEDNSFSGEIPLKFKHFPEITYVDLSLNNFVGGIPSDIYKATHLEYFNVSYNMQLGGNIPSQMWSLPKLQNFSASSCGILGTIPLFEYCKSISAIDLGKNNLSGIIPRSVYKCQALVAIKLSYNNLTGRIPEELASIPILETVELSNNKINGLIPEKFGSSSSLQLLNVSFNNISGSIPKSKSFISMGRSAFVGNSELCGAPLRPCTESVGILGGKSTWKLTYIMLLSVGLLIILLALAFGIHYFKKGFKSQWKMVSFVGLNQFTANDVLTSFSTSTEHTQVPSPVVTKAFLPTGITVLVKKIEWETRSIKLVSEFIMRLGNARHKNLIRVLGFCHNQNLVYLLYDYLQNGNLAEKIGMKWDWEAKLRTVVGIARGLCFLHHDCYPAIPHGDLKSSNIVFDENMEPYLANFGFKHVLQLSKGLSSTTTTHETEYNEELKEELCNDIYNFGKMILEILTGGRFTSVAASIQSKSHEVLLREVCNGNEVSSTSSIQDIKLVLEVAMLCTRSRSSDRPSMDDALKLLSRLKDLEDHKNSK 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01480 982 SUPERFAMILY Protein kinase-like (PK-like) 731 969 IPR011009 -
Car01g01480 982 Pfam Leucine rich repeat N-terminal domain 58 100 IPR013210 -
Car01g01480 982 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 37 974 - -
Car01g01480 982 SUPERFAMILY L domain-like 336 651 - -
Car01g01480 982 PANTHER UNNAMED PRODUCT 37 974 - -
Car01g01480 982 SMART serkin_6 709 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01480 982 Pfam Protein kinase domain 738 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01480 982 Gene3D Ribonuclease Inhibitor 419 655 IPR032675 -
Car01g01480 982 Gene3D Ribonuclease Inhibitor 249 418 IPR032675 -
Car01g01480 982 Gene3D Transferase(Phosphotransferase) domain 1 791 982 - -
Car01g01480 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Car01g01480 982 Gene3D Phosphorylase Kinase; domain 1 692 790 - -
Car01g01480 982 ProSiteProfiles Protein kinase domain profile. 698 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01480 982 SUPERFAMILY RNI-like 107 429 - -
Car01g01480 982 Gene3D Ribonuclease Inhibitor 55 174 IPR032675 -
Car01g01480 982 Gene3D Ribonuclease Inhibitor 175 248 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01480 Car-Chr1 25813219 25816698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01480 45 974 Receptor kinase-like Gene Family AT5G51350 52.119 0.0 913
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car01g01480 Pkinase 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01480 - - aprc:113852384 1438.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01480 01 25813219 25816698 Car01g01480 01 25813219 25816698 ECH