Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01469 ATGTTTTCCCCCTTTACCCTTCACTGGCAGGACCTTTCAAAACTAAACATAAATGCTGCAAAAGTTTTGTACTTAAGTGGCCATGCTTTCAAAAGTTGCCTACAACCTAAGAATCGTGTCCCTCTGCAGACTGATAAAGATGATACAGCTCTTGTGGATTTCATACCATTCATTGAGTTTGTTGCCCGAAGTAGTCCTGCTATTATAAGACCACAAATTTGTACTAATCACCTTGATCCTACCTTGAATTTGATTAACAGTGTTAGAACTTCACTCTTTCTTCTTAATGCTGCATATGATTCATGGCAGATCAAATCTAGTTTAGCTCCTCCATCAACAGATCCCAATGGATATTGGCATGATTGCAGATTAAACCATGCTAAATGTACTAGGCCTGCAAGGTGA 405 0.3901 MFSPFTLHWQDLSKLNINAAKVLYLSGHAFKSCLQPKNRVPLQTDKDDTALVDFIPFIEFVARSSPAIIRPQICTNHLDPTLNLINSVRTSLFLLNAAYDSWQIKSSLAPPSTDPNGYWHDCRLNHAKCTRPAR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01469 134 PANTHER PECTIN ACETYLESTERASE 71 132 - -
Car01g01469 134 PANTHER NOTUM-RELATED 71 132 IPR004963 GO:0016787
Car01g01469 134 Pfam Pectinacetylesterase 83 131 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01469 Car-Chr1 25268626 25269388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01469 71 130 Carbohydrate Esterase AT5G26670 63.077 2.35e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01469 K19882 - mnt:21405475 114.39